RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 NPAS2Q99743 824 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 TBCDQ9BTW9 1192 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 SORBS1Q9BX66 1292 aaKnown RBP14.31□□□□□ -0.12
PRKN-201ENST00000338468 C1QTNF3Q9BXJ4 246 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 PLA2G3Q9NZ20 509 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 TBK1Q9UHD2 729 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 NTNG1Q9Y2I2 539 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 MMACHCQ9Y4U1 282 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 PCDHGA11Q9Y5H2 935 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 A0A088AWK7 358 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 PPP6CO00743 305 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 MAN1A2O60476 641 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 ETHE1O95571 254 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 PYGBP11216 843 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 ZNF10P21506 573 aaPredicted RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 GNLYP22749 145 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 SLC26A5P58743 744 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 RPS13P62277 151 aaKnown RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 ACTN3Q08043 901 aaPredicted RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 DDX39BQ13838 428 aaKnown RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 ZRSR2Q15696 482 aaKnown RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 EXT1Q16394 746 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 CPSF6Q16630 551 aaKnown RBP eCLIP14.3□□□□□ -0.12
PRKN-201ENST00000338468 FAM219BQ5XKK7 198 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 TDRPQ86YL5 185 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 ACOT4Q8N9L9 421 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 NFAM1Q8NET5 270 aaPredicted RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 DNAJB14Q8TBM8 379 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 M1APQ8TC57 530 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 ACMSDQ8TDX5 336 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 UBLCP1Q8WVY7 318 aaPredicted RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.3□□□□□ -0.125e-7■■■■■ 41.5
PRKN-201ENST00000338468 SNRNP40Q96DI7 357 aaKnown RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 LPAR4Q99677 370 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 MAPKAP1Q9BPZ7 522 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 NTMT1Q9BV86 223 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 ZNF717Q9BY31 904 aaPredicted RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 ILKAPQ9H0C8 392 aaPredicted RBP14.3□□□□□ -0.12
PRKN-201ENST00000338468 EPS8L2Q9H6S3 715 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 MMP25Q9NPA2 562 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 ADGRE2Q9UHX3 823 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 EMCNQ9ULC0 261 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 ITPR2Q14571 2701 aa14.3□□□□□ -0.12
PRKN-201ENST00000338468 CENPEQ02224 2701 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 PLPP1O14494 284 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 DLX3O60479 287 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 CLDN9O95484 217 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 F10P00742 488 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 HIST1H1TP22492 207 aaPredicted RBP14.29□□□□□ -0.12
PRKN-201ENST00000338468 PPP2R1BP30154 601 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 HSD17B3P37058 310 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 SLCO1A2P46721 670 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 NEK2P51955 445 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 AP2B1P63010 937 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 TGM3Q08188 693 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 FCRLBQ6BAA4 426 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 CHSY3Q70JA7 882 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 LCA5Q86VQ0 697 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 KIF2BQ8N4N8 673 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 CISD2Q8N5K1 135 aaKnown RBP14.29□□□□□ -0.12
PRKN-201ENST00000338468 SRFBP1Q8NEF9 429 aaKnown RBP14.29□□□□□ -0.12
PRKN-201ENST00000338468 ELP5Q8TE02 316 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 HAS2Q92819 552 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 BARD1Q99728 777 aaKnown RBP14.29□□□□□ -0.12
PRKN-201ENST00000338468 ROGDIQ9GZN7 287 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 COPS7BQ9H9Q2 264 aaPredicted RBP14.29□□□□□ -0.12
PRKN-201ENST00000338468 LYRM4Q9HD34 91 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 SEMA4BQ9NPR2 832 aaPredicted RBP14.29□□□□□ -0.12
PRKN-201ENST00000338468 PRTFDC1Q9NRG1 225 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 ZNF225Q9UK10 706 aa14.29□□□□□ -0.12
PRKN-201ENST00000338468 SAGE2PA6NJ88 616 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 A8MUA0 341 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 A8MUI8 341 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 FOXE1O00358 373 aaPredicted RBP14.28□□□□□ -0.12
PRKN-201ENST00000338468 WDPCPO95876 746 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 TSPAN8P19075 237 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 TNFSF10P50591 281 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 CCNG1P51959 295 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 CDH13P55290 713 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 HSD17B7P56937 341 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 ZNF169Q14929 603 aaPredicted RBP14.28□□□□□ -0.12
PRKN-201ENST00000338468 RASA2Q15283 850 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 UNC50Q53HI1 259 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 OR4C11Q6IEV9 310 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 ZNF595Q8IYB9 648 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 IQCKQ8N0W5 287 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 OR4F6Q8NGB9 312 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 ADAMTS18Q8TE60 1221 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 EPS8L3Q8TE67 593 aaKnown RBP14.28□□□□□ -0.12
PRKN-201ENST00000338468 CNDP1Q96KN2 507 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 TMEM237Q96Q45 408 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 TEP1Q99973 2627 aaKnown RBP14.28□□□□□ -0.12
PRKN-201ENST00000338468 CCDC77Q9BR77 488 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 RNF32Q9H0A6 362 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 KCNK13Q9HB14 408 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 ASF1BQ9NVP2 202 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 PSD3Q9NYI0 1048 aa14.28□□□□□ -0.12
PRKN-201ENST00000338468 CLDN4O14493 209 aa14.27□□□□□ -0.13
PRKN-201ENST00000338468 CTNSO60931 367 aa14.27□□□□□ -0.13
PRKN-201ENST00000338468 EEDO75530 441 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms