RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 HNRNPH1P31943 449 aaKnown RBP9.94□□□□□ -0.82
CAPN3-202ENST00000337571 PTGS2P35354 604 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 HSPA7P48741 367 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 MTTPP55157 894 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 ADORA2A-AS1P86434 159 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 HSF1Q00613 529 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 IRF8Q02556 426 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 PDK4Q16654 411 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 PAOXQ6QHF9 649 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 C3orf62Q6ZUJ4 267 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 SIAH3Q8IW03 269 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 ARMC10Q8N2F6 343 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 SPATA6LQ8N4H0 392 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 FAM47BQ8NA70 645 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 APCDD1LQ8NCL9 501 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 SRFBP1Q8NEF9 429 aaKnown RBP9.94□□□□□ -0.82
CAPN3-202ENST00000337571 ASB15Q8WXK1 588 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 DAZLQ92904 295 aaKnown RBP9.94□□□□□ -0.82
CAPN3-202ENST00000337571 UBE2E3Q969T4 207 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 NCLNQ969V3 563 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 KIAA1191Q96A73 305 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 PTCD3Q96EY7 689 aaKnown RBP9.94□□□□□ -0.82
CAPN3-202ENST00000337571 CPNE1Q99829 537 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 VKORC1Q9BQB6 163 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 ERP44Q9BS26 406 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 EFCAB11Q9BUY7 163 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 KCNF1Q9H3M0 494 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 CAB39LQ9H9S4 337 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 SAYSD1Q9NPB0 183 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 ADAP2Q9NPF8 381 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 RNF112Q9ULX5 631 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 PPT2Q9UMR5 302 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 FAM187AA6NFU0 413 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 A8MVJ9 347 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 TAPBPO15533 448 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 PHGDHO43175 533 aaKnown RBP9.93□□□□□ -0.82
CAPN3-202ENST00000337571 PIAS1O75925 651 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 TUBB4AP04350 444 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 TPOP07202 933 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 GSTA2P09210 222 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 CD1DP15813 335 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 PTGER1P34995 402 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 SPRP35270 261 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-202ENST00000337571 GP5P40197 560 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 RFC3P40938 356 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 KCNC1P48547 511 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 LIM2P55344 173 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 RAB10P61026 200 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 GTF3C1Q12789 2109 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 CBLBQ13191 982 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 DOC2AQ14183 400 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 ELAVL1Q15717 326 aaKnown RBP9.93□□□□□ -0.82
CAPN3-202ENST00000337571 RNFT1Q5M7Z0 435 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 TMEM211Q6ICI0 200 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 ABHD17CQ6PCB6 329 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 HSDL2Q6YN16 418 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 RAPH1Q70E73 1250 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 CHSY3Q70JA7 882 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 CYS1Q717R9 158 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 CLNKQ7Z7G1 428 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 ZNF227Q86WZ6 799 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 CTAGE3PQ8IX95 158 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 GPALPP1Q8IXQ4 340 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 MORN4Q8NDC4 146 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 C16orf52Q8NHV5 167 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 STAG3L4Q8TBR4 150 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 PHF10Q8WUB8 498 aaKnown RBP9.93□□□□□ -0.82
CAPN3-202ENST00000337571 ESAMQ96AP7 390 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 KCNC2Q96PR1 638 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 F2RL3Q96RI0 385 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 RBBP8Q99708 897 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 REPIN1Q9BWE0 567 aaKnown RBP9.93□□□□□ -0.82
CAPN3-202ENST00000337571 ALOXE3Q9BYJ1 711 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 DPH5Q9H2P9 285 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 HPF1Q9NWY4 346 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 KCMF1Q9P0J7 381 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 WHRNQ9P202 907 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 VTI1BQ9UEU0 232 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 ZNF490Q9ULM2 529 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-202ENST00000337571 DAPP1Q9UN19 280 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 PPIEQ9UNP9 301 aaKnown RBP9.93□□□□□ -0.82
CAPN3-202ENST00000337571 UTP11Q9Y3A2 253 aaKnown RBP9.93□□□□□ -0.82
CAPN3-202ENST00000337571 ASB1Q9Y576 335 aa9.93□□□□□ -0.82
CAPN3-202ENST00000337571 A0A1B0GTH9 108 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 CXorf49A8MYA2 514 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-202ENST00000337571 C4orf51C9J302 202 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 ACOT7O00154 380 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 TP73O15350 636 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 ZNHIT1O43257 154 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 DYRK3O43781 588 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 HS6ST1O60243 411 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 OR2J2O76002 312 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 PDE9AO76083 593 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 PCNAP12004 261 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 TFEBP19484 476 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 CERS1P27544 350 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 PPP2R1BP30154 601 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 SSTR2P30874 369 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 MSH2P43246 934 aa9.92□□□□□ -0.82
CAPN3-202ENST00000337571 GPR85P60893 370 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms