RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 C1orf52Q8N6N3 182 aaKnown RBP13.31□□□□□ -0.28
SF1-202ENST00000334944 POF1BQ8WVV4 589 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 FERD3LQ96RJ6 166 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 RBM4BQ9BQ04 359 aaKnown RBP13.31□□□□□ -0.28
SF1-202ENST00000334944 RBM4Q9BWF3 364 aaKnown RBP13.31□□□□□ -0.28
SF1-202ENST00000334944 KCNH6Q9H252 994 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 HSPB11Q9Y547 144 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 I3L521 148 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 TNFRSF21O75509 655 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 KRT20P35900 424 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 MAPK12P53778 367 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 ZNF45Q02386 682 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 ZNF284Q2VY69 593 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 YIPF7Q8N8F6 280 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 REXO5Q96IC2 774 aaKnown RBP13.3□□□□□ -0.28
SF1-202ENST00000334944 TPD52L3Q96J77 140 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 CCDC115Q96NT0 180 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 C17orf62Q9BQA9 187 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 C1QTNF7Q9BXJ2 289 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 DUSP21Q9H596 190 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 C12orf10Q9HB07 376 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 SGK2Q9HBY8 427 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 USE1Q9NZ43 259 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 STOX2Q9P2F5 926 aaPredicted RBP13.3□□□□□ -0.28
SF1-202ENST00000334944 PRUNE2Q8WUY3 3088 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 GRXCR2A6NFK2 248 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 M0R082 166 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 CLIC1O00299 241 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 CEBPBP17676 345 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 GZMMP51124 257 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 TMEM115Q12893 351 aaPredicted RBP13.3□□□□□ -0.28
SF1-202ENST00000334944 CEP68Q76N32 757 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 GPR149Q86SP6 731 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 TMPRSS11BQ86T26 416 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 CFAP206Q8IYR0 622 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 KIAA1958Q8N8K9 716 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 SLC38A4Q969I6 547 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 CMTM7Q96FZ5 175 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 MSANTD3Q96H12 275 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 PKP4Q99569 1192 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 IL36AQ9UHA7 158 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 GMPPBQ9Y5P6 360 aa13.3□□□□□ -0.28
SF1-202ENST00000334944 OR2A25A4D2G3 310 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 TLL1O43897 1013 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 ERN1O75460 977 aaKnown RBP13.29□□□□□ -0.28
SF1-202ENST00000334944 JUPP14923 745 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 MYOGP15173 224 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 M6PRP20645 277 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 NNMTP40261 264 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 ACSM2AQ08AH3 577 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 COL9A2Q14055 689 aaPredicted RBP13.29□□□□□ -0.28
SF1-202ENST00000334944 CYP27C1Q4G0S4 372 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 HENMT1Q5T8I9 393 aaKnown RBP13.29□□□□□ -0.28
SF1-202ENST00000334944 ACSM2BQ68CK6 577 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 BRAT1Q6PJG6 821 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 PARS2Q7L3T8 475 aaKnown RBP13.29□□□□□ -0.28
SF1-202ENST00000334944 TRAPPC5Q8IUR0 188 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 ZDHHC21Q8IVQ6 265 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 CYP4Z2PQ8N1L4 340 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 MRPL43Q8N983 215 aaKnown RBP13.29□□□□□ -0.28
SF1-202ENST00000334944 L3MBTL4Q8NA19 623 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 NEIL2Q969S2 332 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 NXPE3Q969Y0 559 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
SF1-202ENST00000334944 OR2AG1Q9H205 316 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 TAS2R16Q9NYV7 291 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 SH3BP4Q9P0V3 963 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 VPS29Q9UBQ0 182 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 GNG14A0A1W2PPG7 69 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 OTOL1A6NHN0 477 aaPredicted RBP13.29□□□□□ -0.28
SF1-202ENST00000334944 HMX3A6NHT5 357 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 SCELO95171 688 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 IGFBP5P24593 272 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 CTSKP43235 329 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 SOX9P48436 509 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 HNMTP50135 292 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
SF1-202ENST00000334944 ESCO2Q56NI9 601 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 PLEKHS1Q5SXH7 462 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 TUBA3EQ6PEY2 450 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 OR4M2Q8NGB6 313 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 OR4K1Q8NGD4 311 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 BTN2A2Q8WVV5 523 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 GULP1Q9UBP9 304 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 PLAGL1Q9UM63 463 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 ORC6Q9Y5N6 252 aa13.29□□□□□ -0.28
SF1-202ENST00000334944 ZNF106Q9H2Y7 1883 aaKnown RBP13.29□□□□□ -0.28
SF1-202ENST00000334944 A0A0B4J293 547 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 DNAJB5O75953 348 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 TNFRSF1BP20333 461 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 IMPA1P29218 277 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 SLC6A11P48066 632 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 SUZ12Q15022 739 aaKnown RBP13.28□□□□□ -0.28
SF1-202ENST00000334944 TIGD6Q17RP2 521 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 LIPIQ6XZB0 460 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 VN1R2Q8NFZ6 395 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 PJA1Q8NG27 643 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 GLYATL1Q969I3 302 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 RNF31Q96EP0 1072 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 ITPAQ9BY32 194 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms