RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PNCKQ6P2M8 343 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 TRIM40Q6P9F5 258 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 CEACAM20Q6UY09 585 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 FAM129CQ86XR2 697 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 ANKRD13BQ86YJ7 626 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 DRAXINQ8NBI3 349 aaPredicted RBP18.06■□□□□ 0.48
RFTN1-201ENST00000334133 DPEP2Q9H4A9 486 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 EHD1Q9H4M9 534 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 GLOD5A6NK44 160 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 BCHEP06276 602 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 JUNDP17535 347 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 PTX3P26022 381 aaPredicted RBP18.06■□□□□ 0.48
RFTN1-201ENST00000334133 POU1F1P28069 291 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 IDUAP35475 653 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 CDK3Q00526 305 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 CROCCP3Q8IVE0 287 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 SMARCD2Q92925 531 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 ZNF514Q96K75 400 aaPredicted RBP18.06■□□□□ 0.48
RFTN1-201ENST00000334133 KCNK6Q9Y257 313 aa18.06■□□□□ 0.48
RFTN1-201ENST00000334133 KNL1Q8NG31 2342 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 TRBC2A0A5B9 178 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 M0R3G1 203 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 FUCA1P04066 466 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 RB1P06400 928 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 ALPPL2P10696 532 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 HOXB6P17509 224 aaKnown RBP18.05■□□□□ 0.48
RFTN1-201ENST00000334133 KELP23276 732 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 MANFP55145 182 aaKnown RBP18.05■□□□□ 0.48
RFTN1-201ENST00000334133 CYP2A13Q16696 494 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 TMCO5AQ8N6Q1 288 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 HORMAD2Q8N7B1 307 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 GOT1L1Q8NHS2 421 aaPredicted RBP18.05■□□□□ 0.48
RFTN1-201ENST00000334133 POP5Q969H6 163 aaKnown RBP18.05■□□□□ 0.48
RFTN1-201ENST00000334133 GPR34Q9UPC5 381 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 C17orf113A0A1B0GUU1 675 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 OR1F1O43749 312 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 PCSK2P16519 638 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 DRD3P35462 400 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 PIP5KL1Q5T9C9 394 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 P2RY8Q86VZ1 359 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 DCUN1D3Q8IWE4 304 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 JPH3Q8WXH2 748 aaPredicted RBP18.05■□□□□ 0.48
RFTN1-201ENST00000334133 LZICQ8WZA0 190 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 LINC00615Q96LM1 132 aaPredicted RBP18.05■□□□□ 0.48
RFTN1-201ENST00000334133 COPS4Q9BT78 406 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 RSPO3Q9BXY4 272 aaPredicted RBP18.05■□□□□ 0.48
RFTN1-201ENST00000334133 IMP3Q9NV31 184 aaKnown RBP18.05■□□□□ 0.48
RFTN1-201ENST00000334133 TEX10Q9NXF1 929 aaPredicted RBP18.05■□□□□ 0.48
RFTN1-201ENST00000334133 GPR83Q9NYM4 423 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 TAS2R16Q9NYV7 291 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 VCANP13611 3396 aa18.05■□□□□ 0.48
RFTN1-201ENST00000334133 ADAMDEC1O15204 470 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 VEGFDO43915 354 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 LCMT2O60294 686 aaKnown RBP18.04■□□□□ 0.48
RFTN1-201ENST00000334133 HOXB3P14651 431 aaPredicted RBP18.04■□□□□ 0.48
RFTN1-201ENST00000334133 TAS2R38P59533 333 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 PROX2Q3B8N5 592 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 LRRTM4Q86VH4 590 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 C7orf61Q8IZ16 206 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 KRT78Q8N1N4 520 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 OXR1Q8N573 874 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 HRASLS5Q96KN8 279 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 ZNF717Q9BY31 904 aaPredicted RBP18.04■□□□□ 0.48
RFTN1-201ENST00000334133 NADKO95544 446 aaPredicted RBP18.04■□□□□ 0.48
RFTN1-201ENST00000334133 OPRD1P41143 372 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 PIK3CBP42338 1070 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 SOX9P48436 509 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 DSTNP60981 165 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 EEF1A2Q05639 463 aaKnown RBP18.04■□□□□ 0.48
RFTN1-201ENST00000334133 LEXMQ3ZCV2 418 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 KHDRBS2Q5VWX1 349 aaKnown RBP18.04■□□□□ 0.48
RFTN1-201ENST00000334133 VANGL1Q8TAA9 524 aaPredicted RBP18.04■□□□□ 0.48
RFTN1-201ENST00000334133 CXorf40BQ96DE9 158 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 WFDC6Q9BQY6 131 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 SPATA9Q9BWV2 254 aa18.04■□□□□ 0.48
RFTN1-201ENST00000334133 TRIOO75962 3097 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 A0A1W2PP55 124 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 TMPRSS11DO60235 418 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 ST13P50502 369 aaKnown RBP18.03■□□□□ 0.48
RFTN1-201ENST00000334133 SEC13P55735 322 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 FCHO2Q0JRZ9 810 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 GPM6BQ13491 265 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 TP53BP2Q13625 1128 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 SPDYE7PQ495Y7 208 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 TMEM52BQ4KMG9 183 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 ZNF765Q7L2R6 523 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 IGFN1Q86VF2 1251 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 RBM45Q8IUH3 476 aaKnown RBP18.03■□□□□ 0.48
RFTN1-201ENST00000334133 LINC01555Q8NAE3 123 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 TM4SF18Q96CE8 201 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 FERD3LQ96RJ6 166 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 NLNQ9BYT8 704 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 SLC6A17Q9H1V8 727 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 OR52A4PA6NMU1 304 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 C1QTNF3-AMACRE9PGA6 284 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 B4GALT2O60909 372 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 HNRNPCP07910 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
RFTN1-201ENST00000334133 CD36P16671 472 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 PERM1Q5SV97 790 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 DEPDC1Q5TB30 811 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms