RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ANGPT4Q9Y264 503 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 PCDHGA2Q9Y5H1 932 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 DOCK9Q9BZ29 2069 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 FEZF1A0PJY2 475 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 MID1O15344 667 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 IFNA14P01570 189 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 ANXA8P13928 327 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 GJA4P35212 333 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 HSD17B2P37059 387 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 XCR1P46094 333 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 MAPK12P53778 367 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 Q6ZNX1 250 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 LGI4Q8N135 537 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 SLC15A4Q8N697 577 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 SMYD1Q8NB12 490 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 MIPOL1Q8TD10 442 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 CHFRQ96EP1 664 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 NIPSNAP1Q9BPW8 284 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 SFXN1Q9H9B4 322 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 TRPV4Q9HBA0 871 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 SPATA7Q9P0W8 599 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 POFUT2Q9Y2G5 429 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 SNX8Q9Y5X2 465 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 DNMT3AQ9Y6K1 912 aaPredicted RBP13.88□□□□□ -0.19
TPM3-206ENST00000330188 CHD9Q3L8U1 2897 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 A8MVJ9 347 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 GRXCR1A8MXD5 290 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 TBX19O60806 448 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 RECKO95980 971 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 CXCR2P25025 360 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 PSMB9P28065 219 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 LIMS1P48059 325 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 GSSP48637 474 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 CCR8P51685 355 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 SAXO2Q658L1 398 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 AHSA2Q719I0 299 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 ZNF605Q86T29 641 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 ARMC8Q8IUR7 673 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 SLC30A8Q8IWU4 369 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 PARP8Q8N3A8 854 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 OR9Q2Q8NGE9 314 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 TRUB1Q8WWH5 349 aaKnown RBP13.88□□□□□ -0.19
TPM3-206ENST00000330188 SMPDL3AQ92484 453 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 PIP5K1AQ99755 562 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 TEX101Q9BY14 249 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 ABCG4Q9H172 646 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 LHX9Q9NQ69 397 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 MBNL1Q9NR56 388 aaKnown RBP13.88□□□□□ -0.19
TPM3-206ENST00000330188 RAB23Q9ULC3 237 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 CORINQ9Y5Q5 1042 aa13.88□□□□□ -0.19
TPM3-206ENST00000330188 NUMA1Q14980 2115 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 H7BY64 318 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 J3QRK9 145 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 KMOO15229 486 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 CAPN5O15484 640 aaPredicted RBP13.87□□□□□ -0.19
TPM3-206ENST00000330188 PFDN1O60925 122 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 PCDH8O95206 1070 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 KAT7O95251 611 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 CA3P07451 260 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 TFPTP0C1Z6 253 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 CLCNKAP51800 687 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 CSNK2BP67870 215 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 RUNX3Q13761 415 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 ADPRMQ3LIE5 342 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 CEACAM20Q6UY09 585 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.87□□□□□ -0.19
TPM3-206ENST00000330188 PAGE2Q7Z2X7 111 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 P2RY8Q86VZ1 359 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 HORMAD2Q8N7B1 307 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 OR5P2Q8WZ92 322 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 NEURL3Q96EH8 262 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 PDXPQ96GD0 296 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 PRAP1Q96NZ9 151 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 PCBD2Q9H0N5 130 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 NECTIN3Q9NQS3 549 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 ACER3Q9NUN7 267 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 GDE1Q9NZC3 331 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 WBP11Q9Y2W2 641 aaKnown RBP13.87□□□□□ -0.19
TPM3-206ENST00000330188 OR1A2Q9Y585 309 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 C5orf42Q9H799 3197 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 TRBC2A0A5B9 178 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 OR2A25A4D2G3 310 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 SLC22A1O15245 554 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 SLC35G4P0C7Q5 338 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 FUT4P22083 530 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 WASP42768 502 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 ALDH9A1P49189 494 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 ST13P50502 369 aaKnown RBP13.87□□□□□ -0.19
TPM3-206ENST00000330188 DGCR6Q14129 220 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 DUSP6Q16828 381 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 P3H2Q8IVL5 708 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 CCDC103Q8IW40 242 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 LINC01555Q8NAE3 123 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 ABTB1Q969K4 478 aaPredicted RBP13.87□□□□□ -0.19
TPM3-206ENST00000330188 NT5DC2Q9H857 520 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 PLCXD1Q9NUJ7 323 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 SERGEFQ9UGK8 458 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 WDR37Q9Y2I8 494 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 SH3GLB1Q9Y371 365 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms