RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SSR4P51571 173 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 STXBP1P61764 594 aaKnown RBP13.23□□□□□ -0.29
RPP40-201ENST00000319533 RUNX2Q13950 521 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 RBBP5Q15291 538 aaKnown RBP13.23□□□□□ -0.29
RPP40-201ENST00000319533 TOR1AIP1Q5JTV8 583 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 CEP128Q6ZU80 1094 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 TMPRSS11BQ86T26 416 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 DMRTC2Q8IXT2 367 aaPredicted RBP13.23□□□□□ -0.29
RPP40-201ENST00000319533 OR52N2Q8NGI0 321 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 RND1Q92730 232 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 SEC16BQ96JE7 1060 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 QRFPRQ96P65 431 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 PHACTR1Q9C0D0 580 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 RHBGQ9H310 441 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 ZDHHC11Q9H8X9 412 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 DEPPQ9NTK1 212 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 GRHL1Q9NZI5 618 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 TXNDC16Q9P2K2 825 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 FBXW2Q9UKT8 454 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 ZNF407Q9C0G0 2248 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 INTS1Q8N201 2190 aaKnown RBP13.22□□□□□ -0.29
RPP40-201ENST00000319533 PHF3Q92576 2039 aaKnown RBP13.22□□□□□ -0.29
RPP40-201ENST00000319533 LRIT2A6NDA9 550 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 PRKNO60260 465 aaPredicted RBP13.22□□□□□ -0.29
RPP40-201ENST00000319533 CDC40O60508 579 aaKnown RBP eCLIP13.22□□□□□ -0.29
RPP40-201ENST00000319533 ZFAND5O76080 213 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 TBX6O95947 436 aaPredicted RBP13.22□□□□□ -0.29
RPP40-201ENST00000319533 HOXD4P09016 255 aaPredicted RBP13.22□□□□□ -0.29
RPP40-201ENST00000319533 C1GALT1C1LP0DN25 315 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 GSTM2P28161 218 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 HNRNPH1P31943 449 aaKnown RBP13.22□□□□□ -0.29
RPP40-201ENST00000319533 HNMTP50135 292 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 RAB38P57729 211 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 GPR85P60893 370 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 BTN3A2P78410 334 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 KRTAP21-3Q3LHN1 58 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 ADPRMQ3LIE5 342 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 SLCO4C1Q6ZQN7 724 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 RGS9BPQ6ZS82 235 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 CCDC25Q86WR0 208 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.22□□□□□ -0.29
RPP40-201ENST00000319533 ZNF595Q8IYB9 648 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 NKAPQ8N5F7 415 aaKnown RBP13.22□□□□□ -0.29
RPP40-201ENST00000319533 PSD4Q8NDX1 1056 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 TMEM52Q8NDY8 209 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 MNS1Q8NEH6 495 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 TTLQ8NG68 377 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 NCLNQ969V3 563 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 MS4A6EQ96DS6 147 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 PITHD1Q9GZP4 211 aaPredicted RBP13.22□□□□□ -0.29
RPP40-201ENST00000319533 NT5DC2Q9H857 520 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 ADAP2Q9NPF8 381 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 PRTFDC1Q9NRG1 225 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 PNO1Q9NRX1 252 aaKnown RBP13.22□□□□□ -0.29
RPP40-201ENST00000319533 OARD1Q9Y530 152 aa13.22□□□□□ -0.29
RPP40-201ENST00000319533 FAM95CA0A1B0GW59 222 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 PINLYPA6NC86 204 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 NKX2-6A6NCS4 301 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 CDC7O00311 574 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 CLDN4O14493 209 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 KRT38O76015 456 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 GLSO94925 669 aaPredicted RBP13.21□□□□□ -0.29
RPP40-201ENST00000319533 SLU7O95391 586 aaKnown RBP13.21□□□□□ -0.29
RPP40-201ENST00000319533 GSTA2P09210 222 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 GNAZP19086 355 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 SAT1P21673 171 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 PPP2R1BP30154 601 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 SSTR1P30872 391 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 SLC6A12P48065 614 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 NR0B1P51843 470 aaKnown RBP13.21□□□□□ -0.29
RPP40-201ENST00000319533 HNRNPFP52597 415 aaKnown RBP13.21□□□□□ -0.29
RPP40-201ENST00000319533 SLC12A2P55011 1212 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 PPIAP62937 165 aaKnown RBP13.21□□□□□ -0.29
RPP40-201ENST00000319533 ELAVL1Q15717 326 aaKnown RBP13.21□□□□□ -0.29
RPP40-201ENST00000319533 XKR6Q5GH73 641 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 PAOXQ6QHF9 649 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 TMIGD1Q6UXZ0 262 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 ACAD11Q709F0 780 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 ZC3HC1Q86WB0 502 aaKnown RBP13.21□□□□□ -0.29
RPP40-201ENST00000319533 RPRMLQ8N4K4 120 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 NOA1Q8NC60 698 aaKnown RBP13.21□□□□□ -0.29
RPP40-201ENST00000319533 OR2M7Q8NG81 312 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 FBXO25Q8TCJ0 367 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 VPS39Q96JC1 886 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 FAR2Q96K12 515 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 CCDC77Q9BR77 488 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 UCK2Q9BZX2 261 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 DEFB127Q9H1M4 99 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 RHOJQ9H4E5 214 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 KCNJ16Q9NPI9 418 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 KCMF1Q9P0J7 381 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 MYOTQ9UBF9 498 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 KCNN3Q9UGI6 736 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 PSAT1Q9Y617 370 aa13.21□□□□□ -0.29
RPP40-201ENST00000319533 DNAJC13O75165 2243 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 A0A1B0GVC2 190 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 OR14I1A6ND48 311 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 A8MVJ9 347 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 CYR61O00622 381 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 CTNSO60931 367 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms