RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SDR39U1Q9NRG7 319 aaPredicted RBP14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 SH3BP4Q9P0V3 963 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 A0A088AWK7 358 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 A0A1B0GX78 115 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 A0A1W2PR48 441 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 A0A1W2PS29 197 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 AIFM1O95831 613 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 MSL3P1P0C860 447 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 C8orf89P0DMQ9 161 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 COX7A2P14406 83 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 ZNF10P21506 573 aaPredicted RBP14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 CPN2P22792 545 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 PIK3R1P27986 724 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 HNRNPFP52597 415 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 MC2RQ01718 297 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 KLF10Q13118 480 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 GSTA3Q16772 222 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 VPS26BQ4G0F5 336 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 SPANXN4Q5MJ08 99 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 MANEAQ5SRI9 462 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 METTL21CQ5VZV1 264 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 TRPM8Q7Z2W7 1104 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 GPR180Q86V85 440 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 ANKRD46Q86W74 232 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 DSELQ8IZU8 1212 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 TMEM52Q8NDY8 209 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 EXOSC8Q96B26 276 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 CCDC106Q9BWC9 280 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 BRINP2Q9C0B6 783 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 ZNF385DQ9H6B1 395 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 FOXJ2Q9P0K8 574 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 TRPC4Q9UBN4 977 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 DAPP1Q9UN19 280 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 CAPN7Q9Y6W3 813 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 FER1L5A0AVI2 2057 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 CCDC187A0A096LP49 1063 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 ERICH4A6NGS2 130 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 NPIPB8E9PQR5 432 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 ANKRD28O15084 1053 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 PGRMC2O15173 223 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 CHST10O43529 356 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 B4GALT2O60909 372 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 LDB3O75112 727 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 ERAL1O75616 437 aaKnown RBP14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 DKK1O94907 266 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 TNFSF15O95150 251 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 PRPS2P11908 318 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 ITGAXP20702 1163 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 XCR1P46094 333 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 GABPB1Q06547 395 aaPredicted RBP14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 IL11RAQ14626 422 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 ZNF750Q32MQ0 723 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 VWA2Q5GFL6 755 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 DCAF12Q5T6F0 453 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 LCN10Q6JVE6 187 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 TICAM1Q8IUC6 712 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 FUNDC1Q8IVP5 155 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 CA13Q8N1Q1 262 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 CIDECQ96AQ7 238 aaPredicted RBP14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 LIN37Q96GY3 246 aaPredicted RBP14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 FCRL1Q96LA6 429 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 CTSFQ9UBX1 484 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 EXO1Q9UQ84 846 aaKnown RBP14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 ASB4Q9Y574 426 aa14.55□□□□□ -0.08
PDLIM5-202ENST00000318007 NSA2O95478 260 aaKnown RBP14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 PIM1P11309 404 aaPredicted RBP14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 FGF5P12034 268 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 GABREP78334 506 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 FOXC1Q12948 553 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 FAM53BQ14153 422 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 PRSS53Q2L4Q9 553 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 ZNF385BQ569K4 471 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 GARNL3Q5VVW2 1013 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 DNAJC14Q6Y2X3 702 aaPredicted RBP14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 SNX32Q86XE0 403 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 ZCCHC7Q8N3Z6 543 aaKnown RBP14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 GALNT6Q8NCL4 622 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 OR51Q1Q8NH59 317 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 DOK4Q8TEW6 326 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 ZNF304Q9HCX3 659 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 FBXO8Q9NRD0 319 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 PIEZO1Q92508 2521 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 GABRR3A8MPY1 467 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 C9orf172C9J069 976 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 DSCR3O14972 297 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 UBOX5O94941 541 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 FBLP22087 321 aaKnown RBP14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 POLR2JP52435 117 aaKnown RBP14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 ARSFP54793 590 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 KLC1Q07866 573 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 ABHD18Q0P651 414 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 UGT8Q16880 541 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 MINDY4Q4G0A6 757 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 PDCD4Q53EL6 469 aaKnown RBP14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 MLIPQ5VWP3 458 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 OR4F3Q6IEY1 312 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 RHBDD2Q6NTF9 364 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 WDR36Q8NI36 951 aaKnown RBP14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 ARL8BQ9NVJ2 186 aa14.54□□□□□ -0.08
PDLIM5-202ENST00000318007 LOC400499M0QZD8 3231 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms