RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PRKNO60260 465 aaPredicted RBP13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 UGDHO60701 494 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 SH3BGRLO75368 114 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 KRT38O76015 456 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 RPS17P08708 135 aaKnown RBP13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 COL6A2P12110 1019 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 EEF1DP29692 281 aaKnown RBP13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 SERPINB1P30740 379 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 CD96P40200 585 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 PIK3CBP42338 1070 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 GTF2H2Q13888 395 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 TERF2Q15554 542 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 INAQ16352 499 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 TMEM35AQ53FP2 167 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 GTF2H2CQ6P1K8 395 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 ZNF595Q8IYB9 648 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 ADAMTS18Q8TE60 1221 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 UBE2E3Q969T4 207 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 SCMH1Q96GD3 660 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 FAR2Q96K12 515 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 CDK15Q96Q40 435 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 TBCDQ9BTW9 1192 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 C1QTNF3Q9BXJ4 246 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 SLC29A3Q9BZD2 475 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 TRIM45Q9H8W5 580 aaPredicted RBP13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 IPPKQ9H8X2 491 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 KCNK13Q9HB14 408 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 LYRM4Q9HD34 91 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 PRTFDC1Q9NRG1 225 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 ANKRD10Q9NXR5 420 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 CPSF2Q9P2I0 782 aaKnown RBP13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 ERRFI1Q9UJM3 462 aaPredicted RBP13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 EXOC1LA0A1B0GW35 172 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 A8MT66 165 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 A8MUA0 341 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 SAP18O00422 153 aaKnown RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 PPP6CO00743 305 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 PRAMEF2O60811 474 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 SNRPAP09012 282 aaKnown RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 RBP1P09455 135 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 PCNAP12004 261 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 MST1P26927 711 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 TPP2P29144 1249 aaPredicted RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 RPS13P62277 151 aaKnown RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 IGLV3-21P80748 117 aaPredicted RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 SRSF11Q05519 484 aaKnown RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 SLC29A2Q14542 456 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 HIST2H2ACQ16777 129 aaPredicted RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 HIST2H2AA3Q6FI13 130 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 MRM1Q6IN84 353 aaKnown RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 KLC3Q6P597 504 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 SH2D5Q6ZV89 423 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 RPS27LQ71UM5 84 aaKnown RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 ANKRD9Q96BM1 317 aaPredicted RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 PHF21BQ96EK2 531 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 ZNF354BQ96LW1 612 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 MTERF1Q99551 399 aaKnown RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 MRPL46Q9H2W6 279 aaKnown RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 MAP10Q9P2G4 905 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 FETUBQ9UGM5 382 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 ZNF225Q9UK10 706 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 PPT2Q9UMR5 302 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 PCDHGB6Q9Y5F9 930 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 TNPO3Q9Y5L0 923 aaKnown RBP13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 DOPEY1Q5JWR5 2465 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 POLEQ07864 2286 aa13.63□□□□□ -0.23
PPP1CA-201ENST00000312989 A0A088AWK7 358 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 ANKUB1A6NFN9 424 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 GABRR3A8MPY1 467 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 CTNSO60931 367 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 MYO1DO94832 1006 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 EDN3P14138 238 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 ZNF10P21506 573 aaPredicted RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 HPDP32754 393 aaPredicted RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 TRHRP34981 398 aaPredicted RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 BSGP35613 385 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 PIK3CGP48736 1102 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 NEK2P51955 445 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 MLF1P58340 268 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 PMP22Q01453 160 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 ACTN3Q08043 901 aaPredicted RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 MEP1AQ16819 746 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 TSNAXIP1Q2TAA8 658 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 FHL5Q5TD97 284 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 CLNKQ7Z7G1 428 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 ZCCHC7Q8N3Z6 543 aaKnown RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 EIF1ADQ8N9N8 165 aaKnown RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 B3GNT7Q8NFL0 401 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 ZNF483Q8TF39 744 aaPredicted RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 PTPMT1Q8WUK0 201 aaPredicted RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 NR4A3Q92570 626 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 CMTM7Q96FZ5 175 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 MAGEB10Q96LZ2 347 aaPredicted RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 MRPL57Q9BQC6 102 aaKnown RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 NTMT1Q9BV86 223 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 CDCP1Q9H5V8 836 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 NOL11Q9H8H0 719 aaKnown RBP13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 ACTR8Q9H981 624 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 PSD3Q9NYI0 1048 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 TMEM216Q9P0N5 145 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms