RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 DMC1Q14565 340 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 MED22Q15528 200 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 UAP1L1Q3KQV9 507 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 TCEAL5Q5H9L2 206 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 FAM71E1Q6IPT2 247 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 KIAA1958Q8N8K9 716 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 POC5Q8NA72 575 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 GOT1L1Q8NHS2 421 aaPredicted RBP19.9■□□□□ 0.78
RELA-201ENST00000308639 EHD1Q9H4M9 534 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 CXorf36Q9H7Y0 433 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 C11orf16Q9NQ32 467 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.9■□□□□ 0.78
RELA-201ENST00000308639 PLCXD1Q9NUJ7 323 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 CKAP5Q14008 2032 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 ANTXRLA6NF34 631 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 ZNF197O14709 1029 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 MRPS14O60783 128 aaKnown RBP19.9■□□□□ 0.78
RELA-201ENST00000308639 XCR1P46094 333 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 RGS6P49758 472 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 TPRG1LQ5T0D9 272 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 LINC00299Q6ZSB3 139 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 UTS2BQ765I0 119 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 ANKRD33Q7Z3H0 272 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 VN1R5Q7Z5H4 357 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 LSRQ86X29 649 aaPredicted RBP19.9■□□□□ 0.78
RELA-201ENST00000308639 FCGR1BQ92637 280 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 RAB8BQ92930 207 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 PIP5K1AQ99755 562 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 PSD2Q9BQI7 771 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 WFDC6Q9BQY6 131 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 RNF208Q9H0X6 261 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 ZDHHC4Q9NPG8 344 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 SLAMF7Q9NQ25 335 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 TAAR2Q9P1P5 351 aa19.9■□□□□ 0.78
RELA-201ENST00000308639 FFAR1O14842 300 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 SPINT1O43278 529 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 RPLP0P05388 317 aaKnown RBP19.89■□□□□ 0.78
RELA-201ENST00000308639 PCSK2P16519 638 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 CNR2P34972 360 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 OPRD1P41143 372 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 LIM2P55344 173 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 WDR5P61964 334 aaKnown RBP19.89■□□□□ 0.78
RELA-201ENST00000308639 FCHO2Q0JRZ9 810 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 PUM1Q14671 1186 aaKnown RBP eCLIP19.89■□□□□ 0.787e-7■■□□□ 12.5
RELA-201ENST00000308639 ZNF697Q5TEC3 545 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 TMEM39AQ9NV64 488 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 IFT52Q9Y366 437 aa19.89■□□□□ 0.78
RELA-201ENST00000308639 TRBV4-1A0A0J9YWV2 114 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 CHMP24386 653 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 IRS1P35568 1242 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 TPTEP56180 551 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 ERVFC1P60507 584 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 LRRC74AQ0VAA2 488 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 PDE7AQ13946 482 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 ZNF658BQ4V348 819 aaPredicted RBP19.89■□□□□ 0.77
RELA-201ENST00000308639 FAM83HQ6ZRV2 1179 aaPredicted RBP19.89■□□□□ 0.77
RELA-201ENST00000308639 OLIG3Q7RTU3 272 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 BCDIN3DQ7Z5W3 292 aaKnown RBP19.89■□□□□ 0.77
RELA-201ENST00000308639 HMGN2P46Q86SG4 172 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 C12orf40Q86WS4 652 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 HEATR4Q86WZ0 1026 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 RBM45Q8IUH3 476 aaKnown RBP19.89■□□□□ 0.77
RELA-201ENST00000308639 ZNF547Q8IVP9 402 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 SLC5A11Q8WWX8 675 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 HHIPL1Q96JK4 782 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 VPS35Q96QK1 796 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 ZNF556Q9HAH1 456 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 NMNAT1Q9HAN9 279 aaPredicted RBP19.89■□□□□ 0.77
RELA-201ENST00000308639 SNX11Q9Y5W9 270 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 MTCL1Q9Y4B5 1905 aaKnown RBP19.89■□□□□ 0.77
RELA-201ENST00000308639 LILRB5O75023 590 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 SEMA7AO75326 666 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 ALDH9A1P49189 494 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 CSNK2BP67870 215 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 TSTQ16762 297 aaKnown RBP19.89■□□□□ 0.77
RELA-201ENST00000308639 USP43Q70EL4 1123 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 ARMC8Q8IUR7 673 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 KLHDC8AQ8IYD2 350 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 CYP4Z2PQ8N1L4 340 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 PARP16Q8N5Y8 322 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 UCN3Q969E3 161 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 METTL2AQ96IZ6 378 aaKnown RBP19.89■□□□□ 0.77
RELA-201ENST00000308639 COL21A1Q96P44 957 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 FAM83CQ9BQN1 747 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 MMP27Q9H306 513 aa19.89■□□□□ 0.77
RELA-201ENST00000308639 CCNB2O95067 398 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 KCNK2O95069 426 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 DLGAP3O95886 979 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 ALOX5P09917 674 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 NNMTP40261 264 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 RAET1GQ6H3X3 334 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 TRIM40Q6P9F5 258 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 CCDC149Q6ZUS6 474 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 LAS2Q8IYD9 372 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 OXR1Q8N573 874 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 GEMIN6Q8WXD5 167 aaKnown RBP19.88■□□□□ 0.77
RELA-201ENST00000308639 MIEF1Q9NQG6 463 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 THSD1Q9NS62 852 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 HCN4Q9Y3Q4 1203 aa19.88■□□□□ 0.77
RELA-201ENST00000308639 PCDHGA3Q9Y5H0 932 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms