RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 ATP6V1C2Q8NEY4 427 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 USP7Q93009 1102 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 RFKQ969G6 155 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 RIOK2Q9BVS4 552 aaKnown RBP12.92□□□□□ -0.34
SEC23A-201ENST00000307712 SLA2Q9H6Q3 261 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 C12orf4Q9NQ89 552 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 ZNF639Q9UID6 485 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 MGAT4BQ9UQ53 548 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 C2orf78A6NCI8 922 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 SCAMP2O15127 329 aaKnown RBP12.92□□□□□ -0.34
SEC23A-201ENST00000307712 AXIN1O15169 862 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 PDPK1O15530 556 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 HLA-DPB1P04440 258 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 CXCR2P25025 360 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 TIA1P31483 386 aaKnown RBP eCLIP12.92□□□□□ -0.345e-7■■■■■ 33.5
SEC23A-201ENST00000307712 UGT2B10P36537 528 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 MLLT1Q03111 559 aaPredicted RBP12.92□□□□□ -0.34
SEC23A-201ENST00000307712 LEXMQ3ZCV2 418 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 NADSYN1Q6IA69 706 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 PAMR1Q6UXH9 720 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 Q6ZVL8 140 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 VASH1Q7L8A9 365 aaPredicted RBP12.92□□□□□ -0.34
SEC23A-201ENST00000307712 IQCHQ86VS3 1027 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 GALNT13Q8IUC8 556 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 C10orf53Q8N6V4 93 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 OR10H4Q8NGA5 316 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 SETD6Q8TBK2 473 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 SIPA1Q96FS4 1042 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 MSANTD3Q96H12 275 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 FYTTD1Q96QD9 318 aaKnown RBP12.92□□□□□ -0.34
SEC23A-201ENST00000307712 TTLL2Q9BWV7 592 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 OR51V1Q9H2C8 321 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 PAK6Q9NQU5 681 aaPredicted RBP12.92□□□□□ -0.34
SEC23A-201ENST00000307712 HCN2Q9UL51 889 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 NDRG4Q9ULP0 352 aaKnown RBP12.92□□□□□ -0.34
SEC23A-201ENST00000307712 GTF2A1LQ9UNN4 478 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 ENPP4Q9Y6X5 453 aa12.92□□□□□ -0.34
SEC23A-201ENST00000307712 ZFC3H1O60293 1989 aaKnown RBP12.92□□□□□ -0.34
SEC23A-201ENST00000307712 MYADML2A6NDP7 307 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 NEDD8-MDP1E9PL57 170 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 JUNDP17535 347 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 RPL6Q02878 288 aaKnown RBP12.91□□□□□ -0.34
SEC23A-201ENST00000307712 MTAPQ13126 283 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 TCEA2Q15560 299 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 FRMPD2BQ6IN97 320 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 ARL9Q6T311 187 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 RASSF6Q6ZTQ3 369 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 CHST9Q7L1S5 443 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 NEIL3Q8TAT5 605 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 FKBP10Q96AY3 582 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 FAIM2Q9BWQ8 316 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 EXTL2Q9UBQ6 330 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 B4GALT6Q9UBX8 382 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 PCDHGA6Q9Y5G7 932 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 SH3D21A4FU49 640 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 TAPBPO15533 448 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 AOC2O75106 756 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 STC2O76061 302 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 RAB36O95755 333 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 CYP17A1P05093 508 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 RHCEP18577 417 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 NRIP1P48552 1158 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 FLT3LGP49771 235 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 SMSP52788 366 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 CDH11P55287 796 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 ACVR1Q04771 509 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 ADAM15Q13444 863 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 MPPE1Q53F39 396 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 WDR45BQ5MNZ6 344 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 LIPJQ5W064 366 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 ZDHHC20Q5W0Z9 365 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 PHC2Q8IXK0 858 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 DBF4BQ8NFT6 615 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 HUS1BQ8NHY5 278 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 PPIL3Q9H2H8 161 aaKnown RBP12.91□□□□□ -0.34
SEC23A-201ENST00000307712 ENAMQ9NRM1 1142 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 GABRR3A8MPY1 467 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 KMOO15229 486 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 AKAP8O43823 692 aaKnown RBP12.91□□□□□ -0.34
SEC23A-201ENST00000307712 ZNF81P51508 661 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 AKR1D1P51857 326 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 RBBP4Q09028 425 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 ZNF433Q8N7K0 673 aaPredicted RBP12.91□□□□□ -0.34
SEC23A-201ENST00000307712 OR5H6Q8NGV6 325 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 TESCQ96BS2 214 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 CDADC1Q9BWV3 514 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 KCNN2Q9H2S1 579 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 ACTL8Q9H568 366 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 TMEM138Q9NPI0 162 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 SLC6A13Q9NSD5 602 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 MAT2BQ9NZL9 334 aa12.91□□□□□ -0.34
SEC23A-201ENST00000307712 E7EQ34 232 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 PLD2O14939 933 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 PRR35P0CG20 571 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 LGALS3BPQ08380 585 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 YIPF7Q8N8F6 280 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 DCAF4L2Q8NA75 395 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 PDLIM5Q96HC4 596 aaKnown RBP12.9□□□□□ -0.34
SEC23A-201ENST00000307712 SLC35G5Q96KT7 338 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 TRIB3Q96RU7 358 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms