RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SGCDQ92629 289 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 NUS1Q96E22 293 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 ZNF514Q96K75 400 aaPredicted RBP12.76□□□□□ -0.37
DDX54-201ENST00000306014 NEUROD4Q9HD90 331 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 ZNF224Q9NZL3 707 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 IL36AQ9UHA7 158 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 UTS2RQ9UKP6 389 aa12.76□□□□□ -0.37
DDX54-201ENST00000306014 COL24A1Q17RW2 1714 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 HLA-DPB1P04440 258 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 MPC1LP0DKB6 136 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 ITGAMP11215 1152 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 IRF5Q13568 498 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 ANKRD34AQ69YU3 496 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 OR9A1PQ8NGU1 263 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 SNX33Q8WV41 574 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 POF1BQ8WVV4 589 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 RGMAQ96B86 450 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 IFT27Q9BW83 186 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 ZNF385DQ9H6B1 395 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 PHPT1Q9NRX4 125 aaPredicted RBP12.75□□□□□ -0.37
DDX54-201ENST00000306014 TNFRSF10DQ9UBN6 386 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 SCN1AP35498 2009 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 FAM155AB1AL88 458 aaPredicted RBP12.75□□□□□ -0.37
DDX54-201ENST00000306014 RTCAO00442 366 aaKnown RBP12.75□□□□□ -0.37
DDX54-201ENST00000306014 CAPN5O15484 640 aaPredicted RBP12.75□□□□□ -0.37
DDX54-201ENST00000306014 ERI3O43414 337 aaKnown RBP12.75□□□□□ -0.37
DDX54-201ENST00000306014 LEFTY1O75610 366 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 RLN1P04808 185 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 C8orf89P0DMQ9 161 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 GSTM3P21266 225 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 VLDLRP98155 873 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 GRSF1Q12849 480 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDX54-201ENST00000306014 DENND6BQ8NEG7 585 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 OR8J1Q8NGP2 316 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 ZCCHC10Q8TBK6 192 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 CAMK1GQ96NX5 476 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 C11orf49Q9H6J7 331 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 PAK6Q9NQU5 681 aaPredicted RBP12.75□□□□□ -0.37
DDX54-201ENST00000306014 TRIP11Q15643 1979 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 TNFRSF10BO14763 440 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 JRKO75564 520 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 MMP2P08253 660 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 TYRP14679 529 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 AMD1P17707 334 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 TCEA1P23193 301 aaKnown RBP12.75□□□□□ -0.37
DDX54-201ENST00000306014 CXCR4P61073 352 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 TBPL1P62380 186 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 SELENOWP63302 87 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 BIKQ13323 160 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 KCNJ8Q15842 424 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 DLEU7Q6UYE1 221 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 CADM2Q8N3J6 435 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 SLC37A3Q8NCC5 494 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 KLK6Q92876 244 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 DUS3LQ96G46 650 aaKnown RBP12.75□□□□□ -0.37
DDX54-201ENST00000306014 HHIPL1Q96JK4 782 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 CALML5Q9NZT1 146 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 SLC27A6Q9Y2P4 619 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 ASB1Q9Y576 335 aa12.75□□□□□ -0.37
DDX54-201ENST00000306014 URADA6NGE7 173 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 SLC16A5O15375 505 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 OR6A2O95222 327 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 RAB36O95755 333 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 NUDT7P0C024 238 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 C1GALT1C1LP0DN25 315 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 HSD3B1P14060 373 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 RHCEP18577 417 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 NT5EP21589 574 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 IDSP22304 550 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 HSD3B2P26439 372 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CD70P32970 193 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CDKN2CP42773 168 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 DAPP51397 102 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 ARF5P84085 180 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 LGALS3BPQ08380 585 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 SBSNQ6UWP8 590 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 LHFPL3Q86UP9 236 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 ZFP41Q8N8Y5 198 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 PIGKQ92643 395 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 RERGQ96A58 199 aaPredicted RBP12.74□□□□□ -0.37
DDX54-201ENST00000306014 SCRN2Q96FV2 425 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 IL17FQ96PD4 163 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 ZIC5Q96T25 663 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 TMEM27Q9HBJ8 222 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 ADAP2Q9NPF8 381 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 MSRAQ9UJ68 235 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 N6AMT1Q9Y5N5 214 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 KIF13BQ9NQT8 1826 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 MMP20O60882 483 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CYBAP13498 195 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 SPINT3P49223 89 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CLCN7P51798 805 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CLCNKAP51800 687 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 MSANTD1Q6ZTZ1 278 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CEP68Q76N32 757 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 LKAAEAR1Q8TD35 194 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CPPED1Q9BRF8 314 aaPredicted RBP12.74□□□□□ -0.37
DDX54-201ENST00000306014 WNT6Q9Y6F9 365 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 KNL1Q8NG31 2342 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms