RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ZNF557Q8N988 423 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 TEX47Q8TBZ9 253 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 ZFAND1Q8TCF1 268 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 SUSD3Q96L08 255 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 PITX2Q99697 317 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 NMNAT1Q9HAN9 279 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 PLCXD1Q9NUJ7 323 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 KCNN3Q9UGI6 736 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 GOLGB1Q14789 3259 aaKnown RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 TTC3P53804 2025 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 SLC35F4A4IF30 521 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 WASHC1A8K0Z3 465 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 KDELR3O43731 214 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 CYP2A6P11509 494 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 HLA-EP13747 358 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 STOMP27105 288 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 SERPINA4P29622 427 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 PPP2R1BP30154 601 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 GKP32189 559 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 MAGEA2P43356 314 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 MAGEA11P43364 429 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 AVPR1BP47901 424 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 SMIM11AP58511 58 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 PPP3R1P63098 170 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 CCSAPQ6IQ19 270 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 CCDC71Q8IV32 467 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 UROC1Q96N76 676 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 ZFP3Q96NJ6 502 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 CNOT2Q9NZN8 540 aaKnown RBP12.51□□□□□ -0.41
TRIM35-201ENST00000305364 CD84Q9UIB8 345 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 HCN2Q9UL51 889 aa12.51□□□□□ -0.41
TRIM35-201ENST00000305364 MCM3APO60318 1980 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 A0A1W2PRG6 482 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 HOXC5Q00444 222 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 ADAM15Q13444 863 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 KLHL22Q53GT1 634 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 CRB2Q5IJ48 1285 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 BCL2L15Q5TBC7 163 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 AFMIDQ63HM1 303 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 CALHM3Q86XJ0 350 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 LKAAEAR1Q8TD35 194 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 QRFPRQ96P65 431 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 IL17CQ9P0M4 197 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 OR2AG2A6NM03 316 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 POLR1CO15160 346 aaPredicted RBP12.5□□□□□ -0.41
TRIM35-201ENST00000305364 SLC28A2O43868 658 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 C8GP07360 202 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 AMD1P17707 334 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 CELP19835 753 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 CPN2P22792 545 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 CHMP24386 653 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 AKR1D1P51857 326 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 ATP12AP54707 1039 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 ELAVL2Q12926 359 aaKnown RBP12.5□□□□□ -0.41
TRIM35-201ENST00000305364 XKR4Q5GH76 650 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 FAHD1Q6P587 224 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 GLCCI1Q86VQ1 547 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 KLHDC8BQ8IXV7 354 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 IQCF1Q8N6M8 205 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 TTC9BQ8N6N2 239 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 DPF3Q92784 378 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 RTP3Q9BQQ7 232 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 CHIAQ9BZP6 476 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 ABCG5Q9H222 651 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 GALNT9Q9HCQ5 603 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 HMX1Q9NP08 348 aaPredicted RBP12.5□□□□□ -0.41
TRIM35-201ENST00000305364 NDUFAF4Q9P032 175 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 EXTL2Q9UBQ6 330 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 PRSS21Q9Y6M0 314 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 FAM227AF5H4B4 570 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 NR2F1P10589 423 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 PCSK2P16519 638 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 GZMKP49863 264 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 LRRC73Q5JTD7 316 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 FAM205BPQ63HN1 556 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 CDC73Q6P1J9 531 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 LHFPL3Q86UP9 236 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 OR8J1Q8NGP2 316 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 XAGE5Q8WWM1 108 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 SLC9A6Q92581 669 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 MAGEB10Q96LZ2 347 aaPredicted RBP12.5□□□□□ -0.41
TRIM35-201ENST00000305364 TMEM39AQ9NV64 488 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 ZNF226Q9NYT6 803 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 GLTPQ9NZD2 209 aa12.5□□□□□ -0.41
TRIM35-201ENST00000305364 H7C4K7 107 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 SGTAO43765 313 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 IGSF6O95976 241 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 PDGFAP04085 211 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 SCG5P05408 212 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 H1F0P07305 194 aaKnown RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 GPX2P18283 190 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 HMGCLP35914 325 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 MANFP55145 182 aaKnown RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 HSDL2Q6YN16 418 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 ADCK2Q7Z695 626 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 SLC39A13Q96H72 371 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 TM9SF2Q99805 663 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms