RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PCED1AQ9H1Q7 454 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 GIMAP4Q9NUV9 329 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 UTS2RQ9UKP6 389 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 ZNF232Q9UNY5 417 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 TLR4O00206 839 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 AQP1P29972 269 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 BTN3A2P78410 334 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 ZIC1Q15915 447 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 C6orf52Q5T4I8 152 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 GCNT6Q5T4J0 391 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 SLC36A4Q6YBV0 504 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 TMEM26Q6ZUK4 368 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 UBE3DQ7Z6J8 389 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 PJA1Q8NG27 643 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 OR10Q1Q8NGQ4 319 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 ZCCHC10Q8TBK6 192 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 OR5P2Q8WZ92 322 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 NEUROD4Q9HD90 331 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 ERVK-11Q9UQG0 969 aa13.8□□□□□ -0.2
SHCBP1-201ENST00000303383 C1orf226A1L170 272 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 FAM221BA6H8Z2 402 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 ZNF26P17031 533 aaPredicted RBP13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 HOXB6P17509 224 aaKnown RBP13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 CCT8P50990 548 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 GZMMP51124 257 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 TEAD4Q15561 434 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 TMEM154Q6P9G4 183 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 SPESP1Q6UW49 350 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 SFTPA2Q8IWL1 248 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 RBM12BQ8IXT5 1001 aaKnown RBP13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 UBALD2Q8IYN6 164 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 ZNF655Q8N720 491 aaPredicted RBP13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 FAM86B1Q8N7N1 296 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 GOT1L1Q8NHS2 421 aaPredicted RBP13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 PYURFQ96I23 114 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 SLC29A1Q99808 456 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 CCDC3Q9BQI4 270 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 ABCG4Q9H172 646 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 LHX9Q9NQ69 397 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 ENTPD4Q9Y227 616 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 TRIOO75962 3097 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 MDC1Q14676 2089 aaKnown RBP13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 GLOD5A6NK44 160 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 KLHL18O94889 574 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 C1QCP02747 245 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 ETFAP13804 333 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 UQCRC2P22695 453 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 CERS1P27544 350 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 KDELR2P33947 212 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 C21orf59P57076 290 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 PDK3Q15120 406 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 OTUD3Q5T2D3 398 aaPredicted RBP13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 KLHL35Q6PF15 583 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 ZNF551Q7Z340 670 aaPredicted RBP13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 RNF130Q86XS8 419 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 TMEFF1Q8IYR6 380 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 SDR16C5Q8N3Y7 309 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 AMER3Q8N944 861 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 OR52E4Q8NGH9 312 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 OR52N2Q8NGI0 321 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 ZFP28Q8NHY6 868 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 TPD52L3Q96J77 140 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 BATF3Q9NR55 127 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 ADPRHL2Q9NX46 363 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 ABCA7Q8IZY2 2146 aa13.79□□□□□ -0.2
SHCBP1-201ENST00000303383 A0A0A6YYD5 115 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 SOCS2O14508 198 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 ZNF10P21506 573 aaPredicted RBP13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 ATP5A1P25705 553 aaKnown RBP13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 UBE2IP63279 158 aaKnown RBP13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 FADDQ13158 208 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 MPEG1Q2M385 716 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 PPP4R4Q6NUP7 873 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 ZNF793Q6ZN11 406 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 ZC3H7AQ8IWR0 971 aaKnown RBP13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 KCT2Q8NC54 265 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 CAMKVQ8NCB2 501 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 MAL2Q969L2 176 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 SARGQ9BW04 601 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 OSBPL11Q9BXB4 747 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 SPAG17Q6Q759 2223 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 NUDT7P0C024 238 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 PVRP15151 417 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 VEZF1Q14119 521 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 SPIDRQ14159 915 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 INTS11Q5TA45 600 aaKnown RBP13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 KRT80Q6KB66 452 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 TMEM214Q6NUQ4 689 aaKnown RBP13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 PACRGLQ8N7B6 248 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 AVL9Q8NBF6 648 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 GAL3ST3Q96A11 431 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 ZFYVE21Q9BQ24 234 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 C8orf4Q9NR00 106 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 A0A0J9YY10 115 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 H0YJX3 145 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 CSF2P04141 144 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 CDH3P22223 829 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 TP53BP2Q13625 1128 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 SUZ12Q15022 739 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms