RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 OR6C74A6NCV1 312 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 URADA6NGE7 173 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 DPM1O60762 260 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 HPRP00739 348 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 CST1P01037 141 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 C1QCP02747 245 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SEMG1P04279 462 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 NTRK1P04629 796 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SLC35G6P0C7Q6 338 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 NME1P15531 152 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 ZNF23P17027 643 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 JUNDP17535 347 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 CHI3L1P36222 383 aaPredicted RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 CRATP43155 626 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 MANFP55145 182 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 SLAMF1Q13291 335 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 ELOCQ15369 112 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 TCEA2Q15560 299 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 ZNF630Q2M218 657 aaPredicted RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 TOR1AIP1Q5JTV8 583 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 MANEAQ5SRI9 462 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.07□□□□□ -0.8
CLP1-201ENST00000302731 C6orf52Q5T4I8 152 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 GCNT6Q5T4J0 391 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SAXO2Q658L1 398 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 FBXO42Q6P3S6 717 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 TMEM154Q6P9G4 183 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 FIGLAQ6QHK4 219 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SPESP1Q6UW49 350 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SLC36A4Q6YBV0 504 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 TMEM26Q6ZUK4 368 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 CCDC80Q76M96 950 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 PIWIL3Q7Z3Z3 882 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 VN1R4Q7Z5H5 301 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 CARM1Q86X55 608 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 CHERPQ8IWX8 916 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 MMP21Q8N119 569 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SIX5Q8N196 739 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SDR16C5Q8N3Y7 309 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 FAM160A2Q8N612 972 aaPredicted RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 CAMKVQ8NCB2 501 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 PNPT1Q8TCS8 783 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 RSC1A1Q92681 617 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 TFAP2CQ92754 450 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 RDH12Q96NR8 316 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 GUCD1Q96NT3 240 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 OR2A5Q96R48 311 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 LRRC61Q9BV99 259 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 OSBPL10Q9BXB5 764 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 ANKRD60Q9BZ19 345 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 ASPSCR1Q9BZE9 553 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 UCK1Q9HA47 277 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 CD320Q9NPF0 282 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 IL1RAPQ9NPH3 570 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 DNAAF2Q9NVR5 837 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 PDP2Q9P2J9 529 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 PILRAQ9UKJ1 303 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 A0A0J9YY10 115 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 GSAPA4D1B5 854 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 PDLIM1O00151 329 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 DLGAP1O14490 977 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 EI24O14681 340 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 NOBOXO60393 691 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 UBTFL6P0CB48 400 aaPredicted RBP10.06□□□□□ -0.8
CLP1-201ENST00000302731 SMIM10L1P0DMW3 83 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 HOXB3P14651 431 aaPredicted RBP10.06□□□□□ -0.8
CLP1-201ENST00000302731 POLR2CP19387 275 aaPredicted RBP10.06□□□□□ -0.8
CLP1-201ENST00000302731 MAGP20916 626 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 FASLGP48023 281 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 RXRGP48443 463 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 ALDH9A1P49189 494 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 HHEXQ03014 270 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 LRRC23Q53EV4 343 aaPredicted RBP10.06□□□□□ -0.8
CLP1-201ENST00000302731 FCRL6Q6DN72 434 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 OOSP2Q86WS3 158 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 ZDHHC13Q8IUH4 622 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 AMER3Q8N944 861 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 PJA1Q8NG27 643 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 ZFP28Q8NHY6 868 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 BAHD1Q8TBE0 780 aaPredicted RBP10.06□□□□□ -0.8
CLP1-201ENST00000302731 ZDHHC1Q8WTX9 485 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 TMBIM1Q969X1 311 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 SDCCAG3Q96C92 435 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 SMIM10Q96HG1 83 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 VPS50Q96JG6 964 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 SPACA7Q96KW9 195 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 DPH2Q9BQC3 489 aaPredicted RBP10.06□□□□□ -0.8
CLP1-201ENST00000302731 ABCG4Q9H172 646 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 CXorf36Q9H7Y0 433 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 TBC1D17Q9HA65 648 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 SLAMF7Q9NQ25 335 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 SLC35C2Q9NQQ7 365 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 ADPRHL2Q9NX46 363 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 THUMPD1Q9NXG2 353 aaKnown RBP10.06□□□□□ -0.8
CLP1-201ENST00000302731 SMPD3Q9NY59 655 aaPredicted RBP10.06□□□□□ -0.8
CLP1-201ENST00000302731 USE1Q9NZ43 259 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 ZNF451Q9Y4E5 1061 aa10.06□□□□□ -0.8
CLP1-201ENST00000302731 NUP214P35658 2090 aaPredicted RBP10.06□□□□□ -0.8
CLP1-201ENST00000302731 TNRC18O15417 2968 aaPredicted RBP10.05□□□□□ -0.8
CLP1-201ENST00000302731 ARHGEF17Q96PE2 2063 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms