RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 EID3Q8N140 333 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 PACRGLQ8N7B6 248 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 KCT2Q8NC54 265 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 OR52N2Q8NGI0 321 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 NT5CQ8TCD5 201 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 MAL2Q969L2 176 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 VPS50Q96JG6 964 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 OR2A5Q96R48 311 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 BDH2Q9BUT1 245 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 C9orf16Q9BUW7 83 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 TMEM121BQ9BXQ6 578 aaPredicted RBP21.17■□□□□ 0.98
SMAD1-201ENST00000302085 EPS8L2Q9H6S3 715 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 MAGIXQ9H6Y5 334 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 YY1AP1Q9H869 796 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 HRASLS2Q9NWW9 162 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 TAS2R7Q9NYW3 318 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 PILRAQ9UKJ1 303 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 ENTPD2Q9Y5L3 495 aa21.17■□□□□ 0.98
SMAD1-201ENST00000302085 C2orf74A8MZ97 194 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 TLR4O00206 839 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 ETFAP13804 333 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 UQCRC2P22695 453 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 STXBP1P61764 594 aaKnown RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 RACK1P63244 317 aaKnown RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 PDK3Q15120 406 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 SLC5A12Q1EHB4 618 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 TMTC4Q5T4D3 741 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 TRIM40Q6P9F5 258 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 SPESP1Q6UW49 350 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 DGLUCYQ7Z3D6 616 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 IQCHQ86VS3 1027 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 SRFBP1Q8NEF9 429 aaKnown RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 N4BP2L2Q92802 583 aaPredicted RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 POP5Q969H6 163 aaKnown RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 TM4SF19Q96DZ7 209 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 MIR1-1HGQ9H1L0 117 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 Q9H521 79 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 EVA1BQ9NVM1 165 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 RAPGEFL1Q9UHV5 662 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 ZNF639Q9UID6 485 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 A0A1W2PR48 441 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 C19orf67A6NJJ6 358 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 RASAL1O95294 804 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 CHI3L1P36222 383 aaPredicted RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 MANFP55145 182 aaKnown RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 SNRPNP63162 240 aaKnown RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 LRRC23Q53EV4 343 aaPredicted RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 ANGPTL8Q6UXH0 198 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 RNF130Q86XS8 419 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 ZCCHC7Q8N3Z6 543 aaKnown RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 MARVELD2Q8N4S9 558 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 C1GALT1Q9NS00 363 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 UBAP1Q9NZ09 502 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 FAF1Q9UNN5 650 aaPredicted RBP21.16■□□□□ 0.98
SMAD1-201ENST00000302085 ATG4BQ9Y4P1 393 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 KLK4Q9Y5K2 254 aa21.16■□□□□ 0.98
SMAD1-201ENST00000302085 A0A0J9YVX5 310 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 MAGEA13PA6NCF6 341 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 B4DGG1 531 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 DLGAP1O14490 977 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 PRAMEF10O60809 474 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 DEAF1O75398 565 aaPredicted RBP21.15■□□□□ 0.98
SMAD1-201ENST00000302085 DCNP07585 359 aaKnown RBP21.15■□□□□ 0.98
SMAD1-201ENST00000302085 PVRP15151 417 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 NME1P15531 152 aaKnown RBP21.15■□□□□ 0.98
SMAD1-201ENST00000302085 DDX5P17844 614 aaKnown RBP21.15■□□□□ 0.98
SMAD1-201ENST00000302085 CERS1P27544 350 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 PCGF2P35227 344 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 SOAT1P35610 550 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 RPS9P46781 194 aaKnown RBP21.15■□□□□ 0.98
SMAD1-201ENST00000302085 HHEXQ03014 270 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 FAIM2Q9BWQ8 316 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 TM9SF3Q9HD45 589 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 SAMD4AQ9UPU9 718 aaKnown RBP21.15■□□□□ 0.98
SMAD1-201ENST00000302085 MAP4K5Q9Y4K4 846 aa21.15■□□□□ 0.98
SMAD1-201ENST00000302085 RNF103-CHMP3A0A140T963 221 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 K7ESF4 209 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 PRKRAO75569 313 aaKnown RBP21.14■□□□□ 0.98
SMAD1-201ENST00000302085 GCM2O75603 506 aaPredicted RBP21.14■□□□□ 0.98
SMAD1-201ENST00000302085 ZNF682O95780 498 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 LYNP07948 512 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 BTN3A2P78410 334 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 TBPL2Q6SJ96 375 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 C1orf216Q8TAB5 229 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 HSPA12BQ96MM6 686 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 EHD3Q9NZN3 535 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 ANKMY1Q9P2S6 941 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 DNAJB9Q9UBS3 223 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 FBXW2Q9UKT8 454 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 SNX8Q9Y5X2 465 aa21.14■□□□□ 0.98
SMAD1-201ENST00000302085 LOC105369274A0A096LPK9 316 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 LOC102723532A0A0G2JNH3 316 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 GLOD5A6NK44 160 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 PGRMC2O15173 223 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 KRT75O95678 551 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 BCKDHBP21953 392 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 TSFMP43897 325 aaKnown RBP21.14■□□□□ 0.97
SMAD1-201ENST00000302085 CXCL12P48061 93 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 NHSL2Q5HYW2 709 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 UGT2A3Q6UWM9 527 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms