RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 TAP2Q03519 686 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 ABHD18Q0P651 414 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 DMC1Q14565 340 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 LIPJQ5W064 366 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 GPR149Q86SP6 731 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 CYP4Z1Q86W10 505 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 RNF130Q86XS8 419 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 GALNT13Q8IUC8 556 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 ELMOD2Q8IZ81 293 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 RAB8BQ92930 207 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 EXOSC8Q96B26 276 aaKnown RBP9.67□□□□□ -0.86
FOXN4-201ENST00000299162 MAP6Q96JE9 813 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 GORASP2Q9H8Y8 452 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 CD320Q9NPF0 282 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 CTPS2Q9NRF8 586 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 RWDD3Q9Y3V2 267 aa9.67□□□□□ -0.86
FOXN4-201ENST00000299162 BCKDKO14874 412 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 RGS5O15539 181 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 HOXC11O43248 304 aaPredicted RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SSX4O60224 188 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 PRKRAO75569 313 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 IL3P08700 152 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 CRHBPP24387 322 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 DDX6P26196 483 aaKnown RBP eCLIP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 IDH2P48735 452 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SP140Q13342 867 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 TP53BP2Q13625 1128 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ELAVL3Q14576 367 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ATG9BQ674R7 924 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 LYPD8Q6UX82 237 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SLCO4C1Q6ZQN7 724 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 TOR1AIP2Q8NFQ8 470 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 OR9A1PQ8NGU1 263 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 NFKBIDQ8NI38 313 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 DOK4Q8TEW6 326 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 PPCDCQ96CD2 204 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 KCNC2Q96PR1 638 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 MBOAT4Q96T53 435 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 FAM129BQ96TA1 746 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SLC35A5Q9BS91 424 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 MBNL1Q9NR56 388 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 PLSCR3Q9NRY6 295 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 CA5BQ9Y2D0 317 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SNX11Q9Y5W9 270 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 IRAK3Q9Y616 596 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SCN3AQ9NY46 2000 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 J3KTA2 159 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SCAMP2O15127 329 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 TPST2O60704 377 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SEC14L2O76054 403 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 NFATC1O95644 943 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 FABP3P05413 133 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ALOX5P09917 674 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 EPHA5P54756 1037 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ADARB1P78563 741 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 HIST2H2ACQ16777 129 aaPredicted RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SOWAHCQ53LP3 525 aaPredicted RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 C6orf141Q5SZD1 244 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 HIST2H2AA3Q6FI13 130 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ERN2Q76MJ5 926 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 P2RY8Q86VZ1 359 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 AMZ2Q86W34 360 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 LILRB2Q8N423 598 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 GALNT6Q8NCL4 622 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 PAPD5Q8NDF8 572 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 UTP15Q8TED0 518 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 UCN3Q969E3 161 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 RBM4BQ9BQ04 359 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 YIPF4Q9BSR8 244 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 RBM4Q9BWF3 364 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 TMEM245Q9H330 911 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SCN2AQ99250 2005 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ANKDD1BA6NHY2 528 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 NPC1O15118 1278 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 LINC01565O15544 149 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 AP2A2O94973 939 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 VIPP01282 170 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 CTRB1P17538 263 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 GDI1P31150 447 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 RRM2P31350 389 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 VASPP50552 380 aaPredicted RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 HNRNPFP52597 415 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 NUDT6P53370 316 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SRSF11Q05519 484 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 IGSF11Q5DX21 431 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 RPS26P11Q5JNZ5 115 aaPredicted RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 PXDC1Q5TGL8 231 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 CTRB2Q6GPI1 263 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 OR2T5Q6IEZ7 315 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 GRHL2Q6ISB3 625 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 PTOV1Q86YD1 416 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ZZZ3Q8IYH5 903 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 HDDC3Q8N4P3 179 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ZNF540Q8NDQ6 660 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 OR2T29Q8NH02 315 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 OR14C36Q8NHC7 312 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SLC5A11Q8WWX8 675 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 SMARCD2Q92925 531 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms