RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 NDUFA13Q9P0J0 144 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 COPG2Q9UBF2 871 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 GMEB1Q9Y692 573 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 COMMD3-BMI1R4GMX3 469 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 A0A0G2JN53 185 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 LRIT2A6NDA9 550 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 FOXO6A8MYZ6 492 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 STX16-NPEPL1H3BU86 382 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 STX16O14662 325 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 ERI3O43414 337 aaKnown RBP11.41□□□□□ -0.58
HMGB2-201ENST00000296503 CHST10O43529 356 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 DNAJB6O75190 326 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 SMIM10L1P0DMW3 83 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 IMPDH2P12268 514 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 ACPPP15309 386 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 RAP1GDS1P52306 607 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 RAPSNQ13702 412 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 LIPJQ5W064 366 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 ADNP2Q6IQ32 1131 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 TCTN3Q6NUS6 607 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 METTL2BQ6P1Q9 378 aaKnown RBP11.41□□□□□ -0.58
HMGB2-201ENST00000296503 PTRH1Q86Y79 214 aaKnown RBP11.41□□□□□ -0.58
HMGB2-201ENST00000296503 SHISA5Q8N114 240 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 CYP4X1Q8N118 509 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 MZB1Q8WU39 189 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 PPP1R14BQ96C90 147 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 C8orf44Q96CB5 159 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 SMIM10Q96HG1 83 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 REXO4Q9GZR2 422 aaKnown RBP11.41□□□□□ -0.58
HMGB2-201ENST00000296503 RHBGQ9H310 441 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 NOL11Q9H8H0 719 aaKnown RBP11.41□□□□□ -0.58
HMGB2-201ENST00000296503 CHCHD3Q9NX63 227 aaKnown RBP11.41□□□□□ -0.58
HMGB2-201ENST00000296503 FBXL4Q9UKA2 621 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 TP53TG5Q9Y2B4 290 aa11.41□□□□□ -0.58
HMGB2-201ENST00000296503 E2F3O00716 465 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 ALOX12BO75342 701 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 SH3BGRLO75368 114 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 TGFB1P01137 390 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 SBK3P0C264 359 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 IL10P22301 178 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 PLA2G16P53816 162 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 PCDH1Q08174 1060 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 TGM3Q08188 693 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 DDX39BQ13838 428 aaKnown RBP11.4□□□□□ -0.58
HMGB2-201ENST00000296503 GRHL2Q6ISB3 625 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 TRIM40Q6P9F5 258 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 LRRC74BQ6ZQY2 392 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 ASB18Q6ZVZ8 466 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 VN1R5Q7Z5H4 357 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 ALDH16A1Q8IZ83 802 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 GALNT16Q8N428 558 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 TMEM151AQ8N4L1 468 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 OR7G3Q8NG95 312 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 OR11G2Q8NGC1 345 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 PPP4R1Q8TF05 950 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 GAL3ST3Q96A11 431 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 MS4A6EQ96DS6 147 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 F2RL3Q96RI0 385 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 RBCK1Q9BYM8 510 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 AICDAQ9GZX7 198 aa11.4□□□□□ -0.58
HMGB2-201ENST00000296503 CLK4Q9HAZ1 481 aaKnown RBP11.4□□□□□ -0.58
HMGB2-201ENST00000296503 HEMK1Q9Y5R4 338 aaPredicted RBP11.4□□□□□ -0.58
HMGB2-201ENST00000296503 A0A088AWK7 358 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 OR2W5A6NFC9 320 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 TTC36A6NLP5 189 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 A8MT66 165 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 K7EM74 188 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 PSMD12O00232 456 aaPredicted RBP11.4□□□□□ -0.59
HMGB2-201ENST00000296503 GSC2O15499 205 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 B4GALT2O60909 372 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 CDC123O75794 336 aaPredicted RBP11.4□□□□□ -0.59
HMGB2-201ENST00000296503 C1QL1O75973 258 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 CLDN9O95484 217 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 C8orf89P0DMQ9 161 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 ZNF10P21506 573 aaPredicted RBP11.4□□□□□ -0.59
HMGB2-201ENST00000296503 ITGA3P26006 1051 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 PGDP52209 483 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 EEF1A2Q05639 463 aaKnown RBP11.4□□□□□ -0.59
HMGB2-201ENST00000296503 AIMP2Q13155 320 aaKnown RBP11.4□□□□□ -0.59
HMGB2-201ENST00000296503 E2F2Q14209 437 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 CPSF6Q16630 551 aaKnown RBP eCLIP11.4□□□□□ -0.597e-49■■■□□ 18.9
HMGB2-201ENST00000296503 IRAK1BP1Q5VVH5 260 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 CHSY3Q70JA7 882 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 NDUFAF7Q7L592 441 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 CLNKQ7Z7G1 428 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 LAS2Q8IYD9 372 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 FDCSPQ8NFU4 85 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 OR2L5Q8NG80 312 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 TBC1D20Q96BZ9 403 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 REPS1Q96D71 796 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 ZNF184Q99676 751 aaPredicted RBP11.4□□□□□ -0.59
HMGB2-201ENST00000296503 MESP1Q9BRJ9 268 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 VN1R1Q9GZP7 353 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 SEMA4BQ9NPR2 832 aaPredicted RBP11.4□□□□□ -0.59
HMGB2-201ENST00000296503 GPR83Q9NYM4 423 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 ADGRE2Q9UHX3 823 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 PCTPQ9UKL6 214 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 RNF11Q9Y3C5 154 aa11.4□□□□□ -0.59
HMGB2-201ENST00000296503 PCDHGA9Q9Y5G4 932 aaKnown RBP11.4□□□□□ -0.59
HMGB2-201ENST00000296503 PCDHGA11Q9Y5H2 935 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms