RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 RNH1P13489 461 aaKnown RBP8.64□□□□□ -1.03
CNOT9-202ENST00000295701 HIST1H2ADP20671 130 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 JAK1P23458 1154 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 CCND1P24385 295 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 CDC25BP30305 580 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 NUP107P57740 925 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 REEP5Q00765 189 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 RGS1Q08116 209 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 PMPCAQ10713 525 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 SP140Q13342 867 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 CSHL1Q14406 222 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 CRYMQ14894 314 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 RBBP5Q15291 538 aaKnown RBP8.64□□□□□ -1.03
CNOT9-202ENST00000295701 C18orf21Q32NC0 220 aaPredicted RBP8.64□□□□□ -1.03
CNOT9-202ENST00000295701 XKR6Q5GH73 641 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 TOR1AIP1Q5JTV8 583 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 HP1BP3Q5SSJ5 553 aaPredicted RBP8.64□□□□□ -1.03
CNOT9-202ENST00000295701 ARMC3Q5W041 872 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 CYP4Z2PQ8N1L4 340 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 ARMC10Q8N2F6 343 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 CREB3L4Q8TEY5 395 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 SLC5A11Q8WWX8 675 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 FBXL8Q96CD0 374 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 PDLIM2Q96JY6 352 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 HIST1H2AHQ96KK5 128 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 HIST1H2AJQ99878 128 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 FAM167BQ9BTA0 163 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 H2AFJQ9BTM1 129 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 HOMER3Q9NSC5 361 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 KCMF1Q9P0J7 381 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 TNFRSF10DQ9UBN6 386 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 KLF13Q9Y2Y9 288 aaPredicted RBP8.64□□□□□ -1.03
CNOT9-202ENST00000295701 CLDN16Q9Y5I7 305 aa8.64□□□□□ -1.03
CNOT9-202ENST00000295701 FAM166BA8MTA8 275 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 NPIPA2E9PIF3 369 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 NPIPA3F8WFD2 350 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 KLRC4-KLRK1H3BQV0 150 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 PSMD12O00232 456 aaPredicted RBP8.63□□□□□ -1.03
CNOT9-202ENST00000295701 EPB42P16452 691 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 AHRP35869 848 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 CLCN2P51788 898 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 GPR143P51810 404 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 ART1P52961 327 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 IL2P60568 153 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 BTN3A2P78410 334 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 SNTB1Q13884 538 aaKnown RBP8.63□□□□□ -1.03
CNOT9-202ENST00000295701 ZNF750Q32MQ0 723 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 GXYLT1Q4G148 440 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 RNASEH2BQ5TBB1 312 aaKnown RBP8.63□□□□□ -1.03
CNOT9-202ENST00000295701 HECTD2Q5U5R9 776 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 TMEM211Q6ICI0 200 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 CCDC137Q6PK04 289 aaKnown RBP8.63□□□□□ -1.03
CNOT9-202ENST00000295701 NXPE4Q6UWF7 544 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 SBSNQ6UWP8 590 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 IL20RBQ6UXL0 311 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 ABHD13Q7L211 337 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 STRA8Q7Z7C7 330 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 TMPRSS11BQ86T26 416 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 THOC6Q86W42 341 aaKnown RBP8.63□□□□□ -1.03
CNOT9-202ENST00000295701 DMRTC2Q8IXT2 367 aaPredicted RBP8.63□□□□□ -1.03
CNOT9-202ENST00000295701 LMNTD2Q8IXW0 634 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 TMEM156Q8N614 296 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 ZNF321PQ8N8H1 164 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 GPATCH11Q8N954 259 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 ZFP62Q8NB50 900 aaPredicted RBP8.63□□□□□ -1.03
CNOT9-202ENST00000295701 POGLUT1Q8NBL1 392 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 B3GNT7Q8NFL0 401 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 OR5M9Q8NGP3 310 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 RND1Q92730 232 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 NCLNQ969V3 563 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 SEC16BQ96JE7 1060 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 PWWP2AQ96N64 755 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 FAM129AQ9BZQ8 928 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 PNPLA3Q9NST1 481 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 DNAJB12Q9NXW2 375 aaKnown RBP8.63□□□□□ -1.03
CNOT9-202ENST00000295701 SLC22A14Q9Y267 594 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 LIPGQ9Y5X9 500 aa8.63□□□□□ -1.03
CNOT9-202ENST00000295701 NPEPPSL1A6NEC2 478 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 USP27XA6NNY8 438 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 WWP2O00308 870 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 CDC7O00311 574 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 ZNF354AO60765 605 aaPredicted RBP8.62□□□□□ -1.03
CNOT9-202ENST00000295701 OR6B1O95007 311 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 NADKO95544 446 aaPredicted RBP8.62□□□□□ -1.03
CNOT9-202ENST00000295701 CCDC175P0C221 793 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 PGAM1P18669 254 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 SAT1P21673 171 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 CHRNB4P30926 498 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 DNAJA1P31689 397 aaKnown RBP8.62□□□□□ -1.03
CNOT9-202ENST00000295701 HNRNPH1P31943 449 aaKnown RBP8.62□□□□□ -1.03
CNOT9-202ENST00000295701 GDF5P43026 501 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 SSR4P51571 173 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 DLX5P56178 289 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 PPIAP62937 165 aaKnown RBP8.62□□□□□ -1.03
CNOT9-202ENST00000295701 ZNF460Q14592 562 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 CYP1B1Q16678 543 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 TEDDM1Q5T9Z0 273 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 ADNP2Q6IQ32 1131 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 LRRC8EQ6NSJ5 796 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 TRMT10BQ6PF06 316 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms