RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 PNMA8CA0A1B0GUJ8 204 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 FAM221BA6H8Z2 402 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 GFRA2O00451 464 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 RGS10O43665 173 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 SLC16A8O95907 504 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 HPRP00739 348 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 SERPINA4P29622 427 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 MRPL19P49406 292 aaKnown RBP12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 TPTEP56180 551 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 ABHD18Q0P651 414 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 NPRL3Q12980 569 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 KDM4DQ6B0I6 523 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 MACC1Q6ZN28 852 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 PGBD3Q8N328 593 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 SLC5A8Q8N695 610 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 HJURPQ8NCD3 748 aaPredicted RBP12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 ZHX1-C8orf76Q96EF9 292 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 IGSF21Q96ID5 467 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 TMEM68Q96MH6 324 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 CHCHD6Q9BRQ6 235 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 ASPSCR1Q9BZE9 553 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 CWH43Q9H720 699 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 REEP1Q9H902 201 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 LIN7BQ9HAP6 207 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 TBC1D14Q9P2M4 693 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 SNX6Q9UNH7 406 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 RNF6Q9Y252 685 aa12.73□□□□□ -0.37
KCNIP3-201ENST00000295225 PRAMEF25A6NGN4 478 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 EFCAB9A8MZ26 197 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 PSMD9O00233 223 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 SCN2BO60939 215 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ITIH1P19827 911 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ADH7P40394 386 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 MAN2A2P49641 1150 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 DMC1Q14565 340 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 TTLL9Q3SXZ7 439 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 CCDC149Q6ZUS6 474 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 TSEN54Q7Z6J9 526 aaKnown RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 DCAF4L2Q8NA75 395 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 GLB1L3Q8NCI6 653 aaPredicted RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ZNF680Q8NEM1 530 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 OR51B5Q9H339 312 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 SGK2Q9HBY8 427 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 USE1Q9NZ43 259 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 PLAGL1Q9UM63 463 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 MYO9BQ13459 2157 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ARHGEF33A8MVX0 844 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 LRRTM2O43300 516 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 TPST2O60704 377 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 GCM2O75603 506 aaPredicted RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 CCNDBP1O95273 360 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ANXA4P09525 319 aaPredicted RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ACSM2AQ08AH3 577 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 SPATS1Q496A3 300 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 LRIF1Q5T3J3 769 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ACSM2BQ68CK6 577 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 TMPRSS11BQ86T26 416 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 MFSD4AQ8N468 514 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ASB11Q8WXH4 323 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 DACH2Q96NX9 599 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ZNF300Q96RE9 604 aaPredicted RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 COPS4Q9BT78 406 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 WRAP53Q9BUR4 548 aaKnown RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 SCN3BQ9NY72 215 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ZDHHC3Q9NYG2 299 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 PCDHGA6Q9Y5G7 932 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 MYO10Q9HD67 2058 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 SLC16A6O15403 523 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 BRINP1O60477 761 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 GABARAPO95166 117 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 HLA-EP13747 358 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 RAD52P43351 418 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 AP1S1P61966 158 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 RPS13P62277 151 aaKnown RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 STARD3Q14849 445 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 OXA1LQ15070 435 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 DUOXA1Q1HG43 343 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 NIPAL1Q6NVV3 410 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 MZT2BQ6NZ67 158 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 WDR53Q7Z5U6 358 aaPredicted RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 P3H2Q8IVL5 708 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 MCFD2Q8NI22 146 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 GANCQ8TET4 914 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 ZC3H10Q96K80 434 aaKnown RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 TCF25Q9BQ70 676 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 RIOK2Q9BVS4 552 aaKnown RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 SUV39H2Q9H5I1 410 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 HMG20AQ9NP66 347 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 GPATCH2Q9NW75 528 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 C14orf119Q9NWQ9 140 aa12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 SAMD4AQ9UPU9 718 aaKnown RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 CFAP20Q9Y6A4 193 aaKnown RBP12.72□□□□□ -0.37
KCNIP3-201ENST00000295225 NUMA1Q14980 2115 aa12.71□□□□□ -0.37
KCNIP3-201ENST00000295225 TRBV5-4A0A0C4DH59 114 aa12.71□□□□□ -0.37
KCNIP3-201ENST00000295225 WNT9AO14904 365 aa12.71□□□□□ -0.37
KCNIP3-201ENST00000295225 PCDH17O14917 1159 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms