RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TIGARQ9NQ88 270 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR51F1A6NGY5 319 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 G6PDP11413 515 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 MATN1P21941 496 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 EIF2DP41214 584 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 GARNL3Q5VVW2 1013 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 NUDT13Q86X67 352 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 CPXM2Q8N436 756 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 FBXL6Q8N531 539 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 TPT1P8Q9HAU6 139 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 LYARQ9NX58 379 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 FBXW2Q9UKT8 454 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 MED31Q9Y3C7 131 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 COL4A4P53420 1690 aaPredicted RBP11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 SNAP29O95721 258 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 TYRP14679 529 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF81P51508 661 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 CDH11P55287 796 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 TAS2R43P59537 309 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 CDKL1Q00532 357 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 OGDHQ02218 1023 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 CBFBQ13951 182 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF267Q14586 743 aaPredicted RBP11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 MEDAGQ5VYS4 303 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 HFE2Q6ZVN8 426 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 ANKRD13BQ86YJ7 626 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 C2orf73Q8N5S3 287 aaPredicted RBP11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 ANKFN1Q8N957 763 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 TTLQ8NG68 377 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 OR8J3Q8NGG0 315 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 DENND1AQ8TEH3 1009 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 NR4A3Q92570 626 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLC2A13Q96QE2 648 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 LMAN1LQ9HAT1 526 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 BRD7Q9NPI1 651 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 CTPS2Q9NRF8 586 aa11.4□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZSCAN5BA6NJL1 495 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 OPN1SWP03999 348 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF3P17036 446 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 HTR1EP28566 365 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 PDHA2P29803 388 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 EIF4HQ15056 248 aaKnown RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 FAM76BQ5HYJ3 339 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 SPANXN4Q5MJ08 99 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 PYHIN1Q6K0P9 492 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 TMEM220Q6QAJ8 160 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 MSANTD1Q6ZTZ1 278 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 ELMOD2Q8IZ81 293 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 AQP11Q8NBQ7 271 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 LGALS12Q96DT0 336 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 PKP4Q99569 1192 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 ERVK-11Q9UQG0 969 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 PRSS51A0A1B0GVH4 220 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 SDHDO14521 159 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 MATN4O95460 622 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 CSF2P04141 144 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 EBLN1P0CF75 366 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 IL7P13232 177 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 CSNK2A2P19784 350 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 PRKACGP22612 351 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 HSD17B2P37059 387 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 MLLT6P55198 1093 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 GABARAPL2P60520 117 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 RPS3AP61247 264 aaKnown RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 DSG2Q14126 1118 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 HSF5Q4G112 596 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 KIAA1324Q6UXG2 1013 aaKnown RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 CEP68Q76N32 757 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 TSTD1Q8NFU3 115 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 OR4F6Q8NGB9 312 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 FAM110BQ8TC76 370 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 ALPK1Q96QP1 1244 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF717Q9BY31 904 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 RANBP3Q9H6Z4 567 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 PIGVQ9NUD9 493 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 MGAT4BQ9UQ53 548 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 EXOSC1Q9Y3B2 195 aaKnown RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 KAT7O95251 611 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 RENP00797 406 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 ANXA3P12429 323 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 CTHP32929 405 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 MPIP34949 423 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 RASGEF1BQ0VAM2 473 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 GALNT2Q10471 571 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 PON2Q15165 354 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 CCBE1Q6UXH8 406 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 HACD2Q6Y1H2 254 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 CIR1Q86X95 450 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLC15A3Q8IY34 581 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 THRSPQ92748 146 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 RBM18Q96H35 190 aaKnown RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 TBX5Q99593 518 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 POPDC3Q9HBV1 291 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 MRM3Q9HC36 420 aaKnown RBP11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZDHHC3Q9NYG2 299 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 TAS2R10Q9NYW0 307 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 TAS2R9Q9NYW1 312 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF451Q9Y4E5 1061 aa11.39□□□□□ -0.59
SYNGAP1-201ENST00000293748 MANBAO00462 879 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PLD2O14939 933 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms