RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 SLC17A4Q9Y2C5 497 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 SH3GLB1Q9Y371 365 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 ARHGEF17Q96PE2 2063 aaPredicted RBP18.17■□□□□ 0.5
SHF-201ENST00000290894 PRAMEF25A6NGN4 478 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 J3KTA2 159 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 CAPN5O15484 640 aaPredicted RBP18.17■□□□□ 0.5
SHF-201ENST00000290894 NDUFS4O43181 175 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 HTR1AP08908 422 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 DDCP20711 480 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 CXCR2P25025 360 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 FMO3P31513 532 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 TNFRSF4P43489 277 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 CLK3P49761 638 aaKnown RBP18.17■□□□□ 0.5
SHF-201ENST00000290894 ITGA1P56199 1179 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 SELENOWP63302 87 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 CDK6Q00534 326 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 EPS8Q12929 822 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 ZNF691Q5VV52 312 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 Q6ZPB1 254 aaPredicted RBP18.17■□□□□ 0.5
SHF-201ENST00000290894 FBXL6Q8N531 539 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 CCL4L1Q8NHW4 92 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 RAB8BQ92930 207 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 TEFMQ96QE5 360 aaKnown RBP18.17■□□□□ 0.5
SHF-201ENST00000290894 RAB23Q9ULC3 237 aa18.17■□□□□ 0.5
SHF-201ENST00000290894 RPL3P39023 403 aaKnown RBP18.16■□□□□ 0.5
SHF-201ENST00000290894 PRDX1Q06830 199 aaKnown RBP18.16■□□□□ 0.5
SHF-201ENST00000290894 ADAM15Q13444 863 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 TEAD4Q15561 434 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 TPRG1LQ5T0D9 272 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 KDM4DQ6B0I6 523 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 TRIM40Q6P9F5 258 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 ZNF773Q6PK81 442 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 RHNO1Q9BSD3 238 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 CCDC90BQ9GZT6 254 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 SYNPO2LQ9H987 977 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 PAK1IP1Q9NWT1 392 aaPredicted RBP18.16■□□□□ 0.5
SHF-201ENST00000290894 NDUFAF4Q9P032 175 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 ICKQ9UPZ9 632 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 SIPA1Q96FS4 1042 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 OTUB1Q96FW1 271 aaPredicted RBP18.16■□□□□ 0.5
SHF-201ENST00000290894 PCBD2Q9H0N5 130 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 RASSF1Q9NS23 344 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 KRT84Q9NSB2 600 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 SPATA7Q9P0W8 599 aa18.16■□□□□ 0.5
SHF-201ENST00000290894 C4orf51C9J302 202 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 CACNB4O00305 520 aaPredicted RBP18.15■□□□□ 0.5
SHF-201ENST00000290894 SH3BP5O60239 455 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 MAN1A2O60476 641 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 ALPPL2P10696 532 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 ACSL1P33121 698 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 HSD17B2P37059 387 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 BCL6P41182 706 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 SLC19A1P41440 591 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 DMPKQ09013 629 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 KIAA1324Q6UXG2 1013 aaKnown RBP18.15■□□□□ 0.5
SHF-201ENST00000290894 CEACAM20Q6UY09 585 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 IKBIPQ70UQ0 350 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 TSACCQ96A04 125 aaPredicted RBP18.15■□□□□ 0.5
SHF-201ENST00000290894 SPATA9Q9BWV2 254 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 TSC22D4Q9Y3Q8 395 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 NARSO43776 548 aaKnown RBP18.15■□□□□ 0.5
SHF-201ENST00000290894 SSR2P43308 183 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 LRRC74AQ0VAA2 488 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 SMN1Q16637 294 aaKnown RBP18.15■□□□□ 0.5
SHF-201ENST00000290894 BROXQ5VW32 411 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 XAF1Q6GPH4 301 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 LAIR1Q6GTX8 287 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 KIAA1161Q6NSJ0 714 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 ENPP7Q6UWV6 458 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 ZNF793Q6ZN11 406 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 NUDT13Q86X67 352 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 RAB42Q8N4Z0 105 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 TTC29Q8NA56 475 aaPredicted RBP18.15■□□□□ 0.5
SHF-201ENST00000290894 HDAC2Q92769 488 aaKnown RBP18.15■□□□□ 0.5
SHF-201ENST00000290894 MAGED4Q96JG8 741 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 FCRL4Q96PJ5 515 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 TIMM29Q9BSF4 260 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 DGCR6LQ9BY27 220 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 NLNQ9BYT8 704 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 SLC6A20Q9NP91 592 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 MRPS30Q9NP92 439 aaKnown RBP18.15■□□□□ 0.5
SHF-201ENST00000290894 TBC1D29Q9UFV1 150 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 SCN2AQ99250 2005 aa18.15■□□□□ 0.5
SHF-201ENST00000290894 GPR89AB7ZAQ6 455 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 SLC1A7O00341 560 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 HAT1O14929 419 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 PDPK1O15530 556 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 FOXD2O60548 495 aaPredicted RBP18.14■□□□□ 0.49
SHF-201ENST00000290894 B4GALT2O60909 372 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 ATE1O95260 518 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 GPR89BP0CG08 455 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 CD72P21854 359 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 MATN1P21941 496 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 GANABQ14697 944 aaKnown RBP18.14■□□□□ 0.49
SHF-201ENST00000290894 RAB30Q15771 203 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 RPE65Q16518 533 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 UAP1L1Q3KQV9 507 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 PAGE2Q7Z2X7 111 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 DGLUCYQ7Z3D6 616 aa18.14■□□□□ 0.49
SHF-201ENST00000290894 ZBTB46Q86UZ6 589 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms