RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 OR8H1Q8NGG4 311 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 C9orf43Q8TAL5 461 aaPredicted RBP12.85□□□□□ -0.35
SCAF4-201ENST00000286835 GEMIN6Q8WXD5 167 aaKnown RBP12.85□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF566Q969W8 418 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 YIPF4Q9BSR8 244 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
SCAF4-201ENST00000286835 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 CLEC2DQ9UHP7 191 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 ATP1B2P14415 290 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 ATF6P18850 670 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CR2P20023 1033 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CSTF2P33240 577 aaKnown RBP eCLIP12.84□□□□□ -0.356e-21■■■■■ 32.8
SCAF4-201ENST00000286835 HTR2BP41595 481 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 FNDC3BQ53EP0 1204 aaKnown RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 SDE2Q6IQ49 451 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF367Q7RTV3 350 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CCDC71Q8IV32 467 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CFAP206Q8IYR0 622 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 HUS1BQ8NHY5 278 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 FNDC11Q9BVV2 318 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CACYBPQ9HB71 228 aaKnown RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 INSL6Q9Y581 213 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 A0A1W2PQL4 384 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 FGF18O76093 207 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 STATHP02808 62 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 JUPP14923 745 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CTGFP29279 349 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 MICAQ29983 383 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CEP78Q5JTW2 689 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 Q6ZVU0 165 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 FLCNQ8NFG4 579 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 WFDC5Q8TCV5 224 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 COQ8BQ96D53 544 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 C5AR2Q9P296 337 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 LHX3Q9UBR4 397 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 B4GALT6Q9UBX8 382 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CMAHPQ9Y471 501 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 ERAL1O75616 437 aaKnown RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 SLC2A2P11168 524 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 AOAHP28039 575 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 TGFBR2P37173 567 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 HNMTP50135 292 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CRISP1P54107 249 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 RPS7P62081 194 aaKnown RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 FADDQ13158 208 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 ATAT1Q5SQI0 421 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 LRIF1Q5T3J3 769 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 MZT2BQ6NZ67 158 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 USP7Q93009 1102 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 TESCQ96BS2 214 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 TSSK6Q9BXA6 273 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 NDUFAF4Q9P032 175 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 SATB2Q9UPW6 733 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 UGT2B17O75795 530 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 IGFBP1P08833 259 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 IFNA8P32881 189 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 SLAMF1Q13291 335 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 GAB1Q13480 694 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 LCN1P1Q5VSP4 162 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 CXorf57Q6NSI4 855 aaKnown RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 GET4Q7L5D6 327 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 PTOV1Q86YD1 416 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 FAM46DQ8NEK8 389 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 OR2AP1Q8NGE2 309 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 WRAP53Q9BUR4 548 aaKnown RBP12.84□□□□□ -0.35
SCAF4-201ENST00000286835 SUV39H2Q9H5I1 410 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 QPCTLQ9NXS2 382 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 COQ3Q9NZJ6 369 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 GULP1Q9UBP9 304 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 PCDHGB1Q9Y5G3 927 aa12.84□□□□□ -0.35
SCAF4-201ENST00000286835 DSCR3O14972 297 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 SCAMP2O15127 329 aaKnown RBP12.83□□□□□ -0.36
SCAF4-201ENST00000286835 SGTAO43765 313 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 HBA1P69905 142 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 PRKCDQ05655 676 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 ZSWIM7Q19AV6 140 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 CRTC1Q6UUV9 634 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 ZNF551Q7Z340 670 aaPredicted RBP12.83□□□□□ -0.36
SCAF4-201ENST00000286835 LACC1Q8IV20 430 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 EPYCQ99645 322 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 WACQ9BTA9 647 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 TMED9Q9BVK6 235 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 NMNAT1Q9HAN9 279 aaPredicted RBP12.83□□□□□ -0.36
SCAF4-201ENST00000286835 ING3Q9NXR8 418 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 STMN3Q9NZ72 180 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 SLC6A14Q9UN76 642 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 CLCA2Q9UQC9 943 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 PRKAR1AP10644 381 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 RPS19P39019 145 aaKnown RBP12.83□□□□□ -0.36
SCAF4-201ENST00000286835 MAPK8P45983 427 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 HEPACAMQ14CZ8 416 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 WSCD2Q2TBF2 565 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 TPRG1Q6ZUI0 275 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 TMEM173Q86WV6 379 aaPredicted RBP12.83□□□□□ -0.36
SCAF4-201ENST00000286835 TP53INP1Q96A56 240 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 RNFT2Q96EX2 444 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 PIP5K1AQ99755 562 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 UCK2Q9BZX2 261 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 ANKRA2Q9H9E1 313 aa12.83□□□□□ -0.36
SCAF4-201ENST00000286835 TMEM184CQ9NVA4 438 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms