RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 PRIM2P49643 509 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 SELENOWP63302 87 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 IQCCQ4KMZ1 466 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PRRT3Q5FWE3 981 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 TOR1AIP1Q5JTV8 583 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ANKRD34AQ69YU3 496 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 OR2T5Q6IEZ7 315 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 MRM1Q6IN84 353 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 TTC33Q6PID6 262 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 SPESP1Q6UW49 350 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ZNF793Q6ZN11 406 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 CCDC80Q76M96 950 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PIWIL3Q7Z3Z3 882 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PATL1Q86TB9 770 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PAQR7Q86WK9 346 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 RNF130Q86XS8 419 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 HIPK1Q86Z02 1210 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ZC3H7AQ8IWR0 971 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ZNF687Q8N1G0 1237 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 TSPAN14Q8NG11 270 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 OR2L5Q8NG80 312 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 OR2T29Q8NH02 315 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 FLVCR1-AS1Q8TAF5 88 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 GPBAR1Q8TDU6 330 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ZFPM2Q8WW38 1151 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 EXOSC8Q96B26 276 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 SLC22A18Q96BI1 424 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 RMND5BQ96G75 393 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 HSH2DQ96JZ2 352 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 C7orf34Q96L11 122 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 GAS2L1Q99501 681 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 RBM4BQ9BQ04 359 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 RBM4Q9BWF3 364 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 GPR174Q9BXC1 333 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 LMAN1LQ9HAT1 526 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 CLK4Q9HAZ1 481 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 VNN3Q9NY84 501 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 NDUFA13Q9P0J0 144 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 APOBEC3BQ9UH17 382 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ASB4Q9Y574 426 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PCDHGA2Q9Y5H1 932 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 HEATR5BQ9P2D3 2071 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 C4orf51C9J302 202 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 hCG_2039718K7EN88 272 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 AXIN1O15169 862 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 ERI3O43414 337 aaKnown RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 NOBOXO60393 691 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 E2F6O75461 281 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 ARAFP10398 606 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 ATP6V1B1P15313 513 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 HIST1H1TP22492 207 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 ATP5A1P25705 553 aaKnown RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SOAT1P35610 550 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 KCNJ10P78508 379 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 VLDLRP98155 873 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 CDK6Q00534 326 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 ILF3Q12906 894 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 EIF2B5Q13144 721 aaKnown RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SLAMF1Q13291 335 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SCARB2Q14108 478 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 ELOAQ14241 798 aaKnown RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SLC9A5Q14940 896 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 KIR2DS3Q14952 304 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 MLC1Q15049 377 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SMAD2Q15796 467 aaKnown RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 ZNF630Q2M218 657 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SAXO2Q658L1 398 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 FBXO42Q6P3S6 717 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SHQ1Q6PI26 577 aaKnown RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SLC22A18ASQ8N1D0 253 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SRFBP1Q8NEF9 429 aaKnown RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 PJA1Q8NG27 643 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 NFKBIDQ8NI38 313 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 NEURL3Q96EH8 262 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 TPD52L3Q96J77 140 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 KCNC2Q96PR1 638 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 DOHHQ9BU89 302 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 TMEM121BQ9BXQ6 578 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 TOR3AQ9H497 397 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SYNPO2LQ9H987 977 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 ACSS1Q9NUB1 689 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 FAM118AQ9NWS6 357 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 C2orf42Q9NWW7 574 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 EHD3Q9NZN3 535 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 C5AR2Q9P296 337 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 IFT80Q9P2H3 777 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-201ENST00000276573 BAG5Q9UL15 447 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 SNX8Q9Y5X2 465 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 U3KQV3 271 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 PLXND1Q9Y4D7 1925 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 BRWD1Q9NSI6 2320 aa9.11□□□□□ -0.95
TRIM55-201ENST00000276573 M0QX08 132 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 ZW10O43264 779 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 TNFSF14O43557 240 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 DPM1O60762 260 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 SEC24DO94855 1032 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 AQP1P29972 269 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 RPS15AP62244 130 aaKnown RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 EPS8Q12929 822 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 SKIV2LQ15477 1246 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms