RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 BGNP21810 368 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 HIST1H1TP22492 207 aaPredicted RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 ITGA3P26006 1051 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 MTTPP55157 894 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 LIM2P55344 173 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 HNRNPH2P55795 449 aaKnown RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 SKP1P63208 163 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 PHEXP78562 749 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 SLC13A2Q13183 592 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 SSPNQ14714 243 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 CHI3L2Q15782 390 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 GGTA1PQ4G0N0 100 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 TTMPQ5BVD1 217 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 TNFAIP8L3Q5GJ75 292 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 ARL13AQ5H913 290 aaPredicted RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 DCAF10Q5QP82 559 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 DEPDC1Q5TB30 811 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 C18orf63Q68DL7 685 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 METTL2BQ6P1Q9 378 aaKnown RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 CUZD1Q86UP6 607 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 C1orf52Q8N6N3 182 aaKnown RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 EXD3Q8N9H8 876 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 APOBEC4Q8WW27 367 aaKnown RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 UCN3Q969E3 161 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 PTCHD1Q96NR3 888 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 QRFPRQ96P65 431 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 CENPKQ9BS16 269 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 ACPTQ9BZG2 426 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 PITHD1Q9GZP4 211 aaPredicted RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 TEX10Q9NXF1 929 aaPredicted RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 LUZP4Q9P127 313 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 TRPS1Q9UHF7 1281 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 MID2Q9UJV3 735 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 DAPP1Q9UN19 280 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 SNX6Q9UNH7 406 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 NUP214P35658 2090 aaPredicted RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 LRRK2Q5S007 2527 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 A0A1W2PS29 197 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 ITM2AO43736 263 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 ULK1O75385 1050 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 PDGFAP04085 211 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 KLK1P06870 262 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 BPGMP07738 259 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 COX6A1P12074 109 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 PIK3CBP42338 1070 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 DNAJB13P59910 316 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 PCDH1Q08174 1060 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 SLAMF1Q13291 335 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 SH2D4BQ5SQS7 431 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 OR4C11Q6IEV9 310 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 COMMD6Q7Z4G1 85 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 NUDT13Q86X67 352 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 PTRH1Q86Y79 214 aaKnown RBP6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 NUDCD3Q8IVD9 361 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 FDCSPQ8NFU4 85 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 METTL21AQ8WXB1 218 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 RGMAQ96B86 450 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 ABHD17AQ96GS6 310 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 NECTIN3Q9NQS3 549 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZNF446Q9NWS9 450 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 TP53TG5Q9Y2B4 290 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 ATG4BQ9Y4P1 393 aa6.82□□□□□ -1.32
DEPDC1B-201ENST00000265036 A0A088AWK7 358 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 PRMT3O60678 531 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 ONECUT2O95948 504 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 KRT6AP02538 564 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 KRT6BP04259 564 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZNF10P21506 573 aaPredicted RBP6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 GSTM2P28161 218 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 BSGP35613 385 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 KRT6CP48668 564 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 WDR4P57081 412 aaKnown RBP6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 RHAGQ02094 409 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 RHDQ02161 417 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 TGM3Q08188 693 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 Q0VFX4 171 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 TUBB8Q3ZCM7 444 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 SFT2D3Q587I9 215 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 SPDYAQ5MJ70 313 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 HHATQ5VTY9 493 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 FCRLBQ6BAA4 426 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 HDXQ7Z353 690 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 DDIASQ8IXT1 998 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 SIRT6Q8N6T7 355 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 CLEC1AQ8NC01 280 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 THAP4Q8WY91 577 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 TLCD1Q96CP7 247 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 APIPQ96GX9 242 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 SERINC2Q96SA4 455 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 NUDT9Q9BW91 350 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 TGIF2Q9GZN2 237 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 C20orf27Q9GZN8 174 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZBTB20Q9HC78 741 aaPredicted RBP6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 SEMA3GQ9NS98 782 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 NSG1A0A0A6YYJ2 146 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 ATP6AP2A0A1C7CYW4 349 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 ERVH48-1M5A8F1 160 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 ATP6AP2O75787 350 aa6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 JUNP05412 331 aaKnown RBP6.81□□□□□ -1.32
DEPDC1B-201ENST00000265036 CPN2P22792 545 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms