RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SELENOMQ8WWX9 145 aa10.96□□□□□ -0.65
PFDN1-201ENST00000261813 COL26A1Q96A83 441 aa10.96□□□□□ -0.65
PFDN1-201ENST00000261813 MAELQ96JY0 434 aaKnown RBP10.96□□□□□ -0.65
PFDN1-201ENST00000261813 PPP3R2Q96LZ3 170 aa10.96□□□□□ -0.65
PFDN1-201ENST00000261813 BBC3Q96PG8 261 aaPredicted RBP10.96□□□□□ -0.65
PFDN1-201ENST00000261813 LRRC37BQ96QE4 947 aa10.96□□□□□ -0.65
PFDN1-201ENST00000261813 CCNL2Q96S94 520 aaPredicted RBP10.96□□□□□ -0.65
PFDN1-201ENST00000261813 DPH2Q9BQC3 489 aaPredicted RBP10.96□□□□□ -0.65
PFDN1-201ENST00000261813 KLHL31Q9H511 634 aa10.96□□□□□ -0.65
PFDN1-201ENST00000261813 BRF2Q9HAW0 419 aa10.96□□□□□ -0.65
PFDN1-201ENST00000261813 TIMM22Q9Y584 194 aa10.96□□□□□ -0.65
PFDN1-201ENST00000261813 MRPS18BQ9Y676 258 aaKnown RBP10.96□□□□□ -0.65
PFDN1-201ENST00000261813 SMG1Q96Q15 3661 aaKnown RBP10.96□□□□□ -0.66
PFDN1-201ENST00000261813 C21orf140B9A014 251 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 CNOT3O75175 753 aaKnown RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 B3GALT4O96024 378 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 ZNF888P0CJ79 500 aaPredicted RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 SMIM10L1P0DMW3 83 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 PCNAP12004 261 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 ADSLP30566 484 aaPredicted RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 GPC1P35052 558 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 FOXL2P58012 376 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 RAB8AP61006 207 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 NCF4Q15080 339 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 IMPG1Q17R60 797 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 ADPRMQ3LIE5 342 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 ATP6AP1LQ52LC2 224 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 TOR1AIP1Q5JTV8 583 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 SPATA19Q7Z5L4 167 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 TMEM151BQ8IW70 566 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 FAM9CQ8IZT9 166 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 ENDOVQ8N8Q3 282 aaKnown RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 AMER3Q8N944 861 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 OR9A4Q8NGU2 314 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 HUS1BQ8NHY5 278 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 WDR20Q8TBZ3 569 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 UTP15Q8TED0 518 aaKnown RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 KIAA1143Q96AT1 154 aaPredicted RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 MVB12AQ96EY5 273 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 MMABQ96EY8 250 aaPredicted RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 THOC1Q96FV9 657 aaKnown RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 SMIM10Q96HG1 83 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 TUBB6Q9BUF5 446 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 MS4A8Q9BY19 250 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 GPN2Q9H9Y4 310 aaPredicted RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 ZNF304Q9HCX3 659 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 IFT80Q9P2H3 777 aaPredicted RBP10.95□□□□□ -0.66
PFDN1-201ENST00000261813 HEY2Q9UBP5 337 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 PPT2Q9UMR5 302 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 SLC22A7Q9Y694 548 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 FER1L5A0AVI2 2057 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 ACACAQ13085 2346 aa10.95□□□□□ -0.66
PFDN1-201ENST00000261813 LRIT2A6NDA9 550 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 FIGNL2A6NMB9 653 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 TMEM233B4DJY2 109 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 C9J4A7 227 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 NPIPB8E9PQR5 432 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 SGK494L7N484 410 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 SDHDO14521 159 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 FFAR3O14843 346 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 PIP5K1BO14986 540 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 GPR42O15529 346 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 SKAP2O75563 359 aaPredicted RBP10.94□□□□□ -0.66
PFDN1-201ENST00000261813 KLHL18O94889 574 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 NSA2O95478 260 aaKnown RBP10.94□□□□□ -0.66
PFDN1-201ENST00000261813 RAB40ALP0C0E4 278 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 VSIG8P0DPA2 414 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 ALOX12P18054 663 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 LBPP18428 481 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 PRPH2P23942 346 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 SERPINB3P29508 390 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 FOXA1P55317 472 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 RPS18P62269 152 aaKnown RBP10.94□□□□□ -0.66
PFDN1-201ENST00000261813 DDX39BQ13838 428 aaKnown RBP10.94□□□□□ -0.66
PFDN1-201ENST00000261813 SYT16Q17RD7 645 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 SPDYAQ5MJ70 313 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 ARHGAP40Q5TG30 622 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 FAM69BQ5VUD6 431 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 MLIPQ5VWP3 458 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 NXNQ6DKJ4 435 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 GAL3ST3Q96A11 431 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 TUBGCP3Q96CW5 907 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 MS4A6EQ96DS6 147 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 KCNA7Q96RP8 456 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 CENPKQ9BS16 269 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 CPNE5Q9HCH3 593 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 ANKHQ9HCJ1 492 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 TNFRSF12AQ9NP84 129 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 DMRT3Q9NQL9 472 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 AHSPQ9NZD4 102 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 CTSFQ9UBX1 484 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 CDC14AQ9UNH5 594 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 FARSAQ9Y285 508 aaKnown RBP10.94□□□□□ -0.66
PFDN1-201ENST00000261813 TMED5Q9Y3A6 229 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 NAALAD2Q9Y3Q0 740 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 PCDHGA6Q9Y5G7 932 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 SETXQ7Z333 2677 aaKnown RBP10.94□□□□□ -0.66
PFDN1-201ENST00000261813 APC2O95996 2303 aa10.94□□□□□ -0.66
PFDN1-201ENST00000261813 A0A0G2JN53 185 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 URADA6NGE7 173 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms