RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 MARC1Q5VT66 337 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 MFSD14CQ5VZR4 134 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 TMIGD1Q6UXZ0 262 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 DCUN1D3Q8IWE4 304 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 CELF5Q8N6W0 485 aaKnown RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF784Q8NCA9 323 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 SMG8Q8ND04 991 aaKnown RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 OR5J2Q8NH18 312 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF431Q8TF32 576 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 HSD17B8Q92506 261 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 CORO2AQ92828 525 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 PDLIM5Q96HC4 596 aaKnown RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 DCAF5Q96JK2 942 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 OR14A2Q96R54 314 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 GANQ9H2C0 597 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 NRIP3Q9NQ35 241 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ADARB2Q9NS39 739 aaKnown RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 RXFP3Q9NSD7 469 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 TRPC4Q9UBN4 977 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 TAF6LQ9Y6J9 622 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ATP6AP2A0A1C7CYW4 349 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 hCG_1809904A0A1W2PP81 198 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 A0A1W2PPE2 198 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 A0A1W2PR64 198 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ARHGEF33A8MVX0 844 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 I6L893 689 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 PSMA7O14818 248 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 LRCH4O75427 683 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 SOAT2O75908 522 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 RGS9O75916 674 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 LATS1O95835 1130 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 C6orf47O95873 294 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ITGAMP11215 1152 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ACPPP15309 386 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 SFNP31947 248 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 MC5RP33032 325 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 GRIA4P48058 902 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 SLC11A2P49281 568 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 DUSP8Q13202 625 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF404Q494X3 552 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 CELF3Q5SZQ8 465 aaKnown RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 FBXW9Q5XUX1 488 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ACAD10Q6JQN1 1059 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 SLC39A5Q6ZMH5 540 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 RANBP3LQ86VV4 465 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 CPOQ8IVL8 374 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 CCDC105Q8IYK2 499 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 MAML2Q8IZL2 1156 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-201ENST00000258733 MS4A15Q8N5U1 240 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 GPRC5AQ8NFJ5 357 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 OR13C2Q8NGS9 318 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 DUSP19Q8WTR2 217 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 SLC38A3Q99624 504 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 NT5DC2Q9H857 520 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 CD320Q9NPF0 282 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF302Q9NR11 478 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 MAGEL2Q9UJ55 1249 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 FEM1BQ9UK73 627 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 TCFL5Q9UL49 500 aa7.44□□□□□ -1.22
GPNMB-201ENST00000258733 ROBO2Q9HCK4 1378 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 A0A1W2PP18 115 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 FAM86B1E9PN63 330 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 KPNA3O00505 521 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 INHBAP08476 426 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 FAM86B2P0C5J1 330 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 HIST1H1BP16401 226 aaKnown RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 SMPD1P17405 629 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 ERCC2P18074 760 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 NPR2P20594 1047 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 EPHA8P29322 1005 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 GRB14Q14449 540 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF174Q15697 407 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF239Q16600 458 aaKnown RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 NDUFAF6Q330K2 333 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 PKDCCQ504Y2 493 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 TPRG1LQ5T0D9 272 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 TEDDM1Q5T9Z0 273 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 C18orf63Q68DL7 685 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 SULT6B1Q6IMI4 303 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 FAM199XQ6PEV8 388 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 CES3Q6UWW8 571 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 LBX2Q6XYB7 198 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 BHLHA15Q7RTS1 189 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 P4HA3Q7Z4N8 544 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 ABI3BPQ7Z7G0 1075 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 FAM89BQ8N5H3 189 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 FAM86B1Q8N7N1 296 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 CCDC54Q8NEL0 328 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 PCDH19Q8TAB3 1148 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 WDR20Q8TBZ3 569 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 CHURC1Q8WUH1 139 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 HAS1Q92839 578 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 ISG20Q96AZ6 181 aaKnown RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 OR2A14Q96R47 310 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 P2RY13Q9BPV8 354 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 DGCR6LQ9BY27 220 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF436Q9C0F3 470 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 PUS7LQ9H0K6 701 aaKnown RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 PCBD2Q9H0N5 130 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 MMP28Q9H239 520 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms