RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 IFT88Q13099 833 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 MFAP5Q13361 173 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 BTBD16Q32M84 506 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 NADK2Q4G0N4 442 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 UNC50Q53HI1 259 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 ZNF793Q6ZN11 406 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 ZCCHC7Q8N3Z6 543 aaKnown RBP22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 OR2W6PQ8NHA6 318 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 RDH11Q8TC12 318 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 BRIX1Q8TDN6 353 aaKnown RBP22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 PSMF1Q92530 271 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 SERPINI1Q99574 410 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 EPN3Q9H201 632 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 MS4A12Q9NXJ0 267 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 MID2Q9UJV3 735 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 SNX6Q9UNH7 406 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 BSNQ9UPA5 3926 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 HELZ2Q9BYK8 2649 aaKnown RBP22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 SEMA3DO95025 777 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 UQCRHP07919 91 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 MYL2P10916 166 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 KRT4P19013 534 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 SCUBE1Q8IWY4 988 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 TMEM237Q96Q45 408 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 ELOVL6Q9H5J4 265 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 MMP25Q9NPA2 562 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 SLAMF7Q9NQ25 335 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 NECTIN3Q9NQS3 549 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 KCMF1Q9P0J7 381 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 LGALS13Q9UHV8 139 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 TEKT2Q9UIF3 430 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 EMCNQ9ULC0 261 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 B3GNT3Q9Y2A9 372 aa22.85■■□□□ 1.25
SDF2L1-201ENST00000248958 RTCAO00442 366 aaKnown RBP22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 CYR61O00622 381 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 PLPP1O14494 284 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 CTNSO60931 367 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 SH3BGRLO75368 114 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 PROCP04070 461 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 MAOAP21397 527 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 SOX11P35716 441 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 TLE1Q04724 770 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 SLC13A2Q13183 592 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 SLC6A19Q695T7 634 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 ZYG11AQ6WRX3 759 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 RNF175Q8N4F7 328 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 FAM47BQ8NA70 645 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 TRPC4APQ8TEL6 797 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 ZNF382Q96SR6 550 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 TMEM109Q9BVC6 243 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 MKS1Q9NXB0 559 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 AHSPQ9NZD4 102 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 PTGFRNQ9P2B2 879 aa22.84■■□□□ 1.25
SDF2L1-201ENST00000248958 CPAMD8Q8IZJ3 1885 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 SPTA1P02549 2419 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 FOXO6A8MYZ6 492 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 H3BQF6 201 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 SAP18O00422 153 aaKnown RBP22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 PLIN3O60664 434 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 SORBS2O94875 1100 aaKnown RBP22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 ITGAMP11215 1152 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 NEK2P51955 445 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 SLC26A5P58743 744 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 SLAMF1Q13291 335 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 TERF2Q15554 542 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 Q6ZS92 163 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 RPS27LQ71UM5 84 aaKnown RBP22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 MAPKAP1Q9BPZ7 522 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 MFRPQ9BY79 579 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 IQCGQ9H095 443 aaKnown RBP22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 BRF2Q9HAW0 419 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 ZBTB20Q9HC78 741 aaPredicted RBP22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 PHF11Q9UIL8 331 aa22.83■■□□□ 1.25
SDF2L1-201ENST00000248958 BOD1L1Q8NFC6 3051 aa22.83■■□□□ 1.24
SDF2L1-201ENST00000248958 SAGE2PA6NJ88 616 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 TTLL8A6PVC2 850 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 G3V2L1 256 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 CELA2AP08217 269 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 CPN2P22792 545 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 PKNOX1P55347 436 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 H3F3CQ6NXT2 135 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 LETMD1Q6P1Q0 360 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 TRABD2AQ86V40 505 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 NUDT13Q86X67 352 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 C4orf33Q8N1A6 199 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 SIRT6Q8N6T7 355 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 CCDC63Q8NA47 563 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 SELENOMQ8WWX9 145 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 MTFMTQ96DP5 389 aaKnown RBP22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 ZNF354BQ96LW1 612 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 CSF3RQ99062 836 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 DDX31Q9H8H2 851 aaKnown RBP22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 KCNK13Q9HB14 408 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 NMRK1Q9NWW6 199 aa22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 LYARQ9NX58 379 aaKnown RBP22.82■■□□□ 1.24
SDF2L1-201ENST00000248958 DYTNA2CJ06 578 aa22.81■■□□□ 1.24
SDF2L1-201ENST00000248958 PPP6CO00743 305 aa22.81■■□□□ 1.24
SDF2L1-201ENST00000248958 OR4F21O95013 312 aa22.81■■□□□ 1.24
SDF2L1-201ENST00000248958 TSPAN8P19075 237 aa22.81■■□□□ 1.24
SDF2L1-201ENST00000248958 TLX1P31314 330 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms