RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 HMGN2P46Q86SG4 172 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 SLC9B2Q86UD5 537 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 ADGRF3Q8IZF5 1079 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 KRT78Q8N1N4 520 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 CPA6Q8N4T0 437 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 RAB8BQ92930 207 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 COX14Q96I36 57 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 WDR26Q9H7D7 661 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 SLAMF7Q9NQ25 335 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 TAS2R9Q9NYW1 312 aa15.05■□□□□ -0
LRFN1-201ENST00000248668 KIF26AQ9ULI4 1882 aaPredicted RBP15.04■□□□□ -0
LRFN1-201ENST00000248668 PRKRAO75569 313 aaKnown RBP15.04■□□□□ -0
LRFN1-201ENST00000248668 HOXB3P14651 431 aaPredicted RBP15.04■□□□□ -0
LRFN1-201ENST00000248668 CDH3P22223 829 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 PCGF2P35227 344 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 ITGA1P56199 1179 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 NUP107P57740 925 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 LRRC74AQ0VAA2 488 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 DUSP6Q16828 381 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 FAM129CQ86XR2 697 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 FGF14Q92915 247 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 NRBF2Q96F24 287 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 PLEKHA8Q96JA3 519 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 MAGED4Q96JG8 741 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 CXorf36Q9H7Y0 433 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 NDUFAF4Q9P032 175 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 KLHL20Q9Y2M5 609 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 DOCK8Q8NF50 2099 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 PRAMEF25A6NGN4 478 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 EPOPA6NHQ4 379 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 GLOD5A6NK44 160 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 SLC16A6O15403 523 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 FADS2O95864 444 aaKnown RBP15.04■□□□□ -0
LRFN1-201ENST00000248668 CDK6Q00534 326 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 PCDH1Q08174 1060 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 RFX4Q33E94 735 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 IQCCQ4KMZ1 466 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 KIAA1211LQ6NV74 962 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 PARM1Q6UWI2 310 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 CAMKMTQ7Z624 323 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 FAM124AQ86V42 546 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 CCDC71Q8IV32 467 aaPredicted RBP15.04■□□□□ -0
LRFN1-201ENST00000248668 FEVQ99581 238 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 TNFRSF11BO00300 401 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 TNFRSF21O75509 655 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 CCNA2P20248 432 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 PTX3P26022 381 aaPredicted RBP15.04■□□□□ -0
LRFN1-201ENST00000248668 RPP38P78345 283 aaKnown RBP15.04■□□□□ -0
LRFN1-201ENST00000248668 E2F2Q14209 437 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 FAM46CQ5VWP2 391 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 UNC5DQ6UXZ4 953 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 OLIG3Q7RTU3 272 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 LINC01555Q8NAE3 123 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 ZNF540Q8NDQ6 660 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 OR5K2Q8NHB8 316 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 OR14C36Q8NHC7 312 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 WDR34Q96EX3 536 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 FUNDC2Q9BWH2 189 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 HDAC8Q9BY41 377 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 MYNNQ9NPC7 610 aa15.04■□□□□ -0
LRFN1-201ENST00000248668 KIAA1549LQ6ZVL6 1849 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 A6NL46 340 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 PDZK1P1A8MUH7 402 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 SLC31A1O15431 190 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 LCMT2O60294 686 aaKnown RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 C9P02748 559 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 ALPPL2P10696 532 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 PPIBP23284 216 aaKnown RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 GSTM2P28161 218 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 SELENOWP63302 87 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 KRT33BQ14525 404 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 NPTX1Q15818 432 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 OR9Q2Q8NGE9 314 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 OR52N2Q8NGI0 321 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 METTL2AQ96IZ6 378 aaKnown RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 MYADMQ96S97 322 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 PRDM8Q9NQV8 689 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 CORO2BQ9UQ03 480 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 GPC6Q9Y625 555 aaPredicted RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 FAM227AF5H4B4 570 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 FAM20BO75063 409 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 UGT2B11O75310 529 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 SEC14L2O76054 403 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 HTR1BP28222 390 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 TTKP33981 857 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 PCYT1AP49585 367 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 MANFP55145 182 aaKnown RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 EMX1Q04741 257 aaPredicted RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 NFATC3Q12968 1075 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 SHHQ15465 462 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 METRNLQ641Q3 311 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 LCTLQ6UWM7 567 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 ADAMTSL4Q6UY14 1074 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 INSM2Q96T92 566 aaPredicted RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 MKRN2Q9H000 416 aaKnown RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 EHD1Q9H4M9 534 aa15.03■□□□□ -0
LRFN1-201ENST00000248668 TEX10Q9NXF1 929 aaPredicted RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 ZFR2Q9UPR6 939 aaKnown RBP15.03■□□□□ -0
LRFN1-201ENST00000248668 PRAMEF10O60809 474 aa15.02■□□□□ -0
LRFN1-201ENST00000248668 IDH2P48735 452 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms