RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 DHCR24Q15392 516 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 MAPK11Q15759 364 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 BCL7AQ4VC05 210 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 CRB2Q5IJ48 1285 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 NXPE4Q6UWF7 544 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 CADM3Q8N126 398 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 METTL4Q8N3J2 472 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 MINDY2Q8NBR6 621 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF675Q8TD23 568 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 GEMIN6Q8WXD5 167 aaKnown RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 LRRC3BQ96PB8 259 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 SORBS1Q9BX66 1292 aaKnown RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 ACER3Q9NUN7 267 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 SLC6A14Q9UN76 642 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 NUP210Q8TEM1 1887 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 MYO7AQ13402 2215 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 PSMD11O00231 422 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 CISD3P0C7P0 127 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 CD40LGP29965 261 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 GRK5P34947 590 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 UGT2B10P36537 528 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF630Q2M218 657 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-202ENST00000244303 C10orf62Q5T681 223 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-202ENST00000244303 PLEKHG7Q6ZR37 379 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 KIAA1958Q8N8K9 716 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 SCAIQ8N9R8 606 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 GTPBP3Q969Y2 492 aaKnown RBP13.74□□□□□ -0.21
HIF3A-202ENST00000244303 DACH2Q96NX9 599 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 FAM129BQ96TA1 746 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF556Q9HAH1 456 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 CCDC177Q9NQR7 707 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-202ENST00000244303 POLE4Q9NR33 117 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 SLC9A3R1O14745 358 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-202ENST00000244303 ADORA3P0DMS8 318 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 ARAFP10398 606 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 PPP5CP53041 499 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 PCBP3P57721 371 aaKnown RBP13.74□□□□□ -0.21
HIF3A-202ENST00000244303 TUBA1BP68363 451 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 INAVAQ3KP66 663 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF404Q494X3 552 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 RAET1GQ6H3X3 334 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 TUBA1AQ71U36 451 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 SLC46A3Q7Z3Q1 461 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 DEPDC4Q8N2C3 294 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 STX19Q8N4C7 294 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 C2orf73Q8N5S3 287 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-202ENST00000244303 DENND6BQ8NEG7 585 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 PSMA8Q8TAA3 256 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 HCAR2Q8TDS4 363 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 IL17FQ96PD4 163 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 PIP5K1AQ99755 562 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 SLC6A16Q9GZN6 736 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 IMPAD1Q9NX62 359 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 RAB23Q9ULC3 237 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 DUSP12Q9UNI6 340 aa13.74□□□□□ -0.21
HIF3A-202ENST00000244303 LINC01553A4QN01 128 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 METTL15A6NJ78 407 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 A8MVJ9 347 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 GADD45GO95257 159 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 PTHP01270 115 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 GSTT2P0CG29 244 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 GSTT2BP0CG30 244 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 LIMS1P48059 325 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 DGKGP49619 791 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 CYP4F2P78329 520 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 UBE3AQ05086 875 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 ST3GAL4Q11206 333 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 VN1R5Q7Z5H4 357 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF547Q8IVP9 402 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF707Q96C28 371 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-202ENST00000244303 ZCCHC2Q9C0B9 1178 aaKnown RBP13.73□□□□□ -0.21
HIF3A-202ENST00000244303 ANKHQ9HCJ1 492 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 MIEF1Q9NQG6 463 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 TAAR2Q9P1P5 351 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 RHCGQ9UBD6 479 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 ANGPT4Q9Y264 503 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 MRPS23Q9Y3D9 190 aaKnown RBP13.73□□□□□ -0.21
HIF3A-202ENST00000244303 LOC100506127A0A0U1RQW1 187 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 TRBC2A0A5B9 178 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 KRT75O95678 551 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 RECKO95980 971 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 IFNA14P01570 189 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 CYP17A1P05093 508 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 DBTP11182 482 aaKnown RBP13.73□□□□□ -0.21
HIF3A-202ENST00000244303 EIF2DP41214 584 aaKnown RBP13.73□□□□□ -0.21
HIF3A-202ENST00000244303 PIK3CBP42338 1070 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 GPR1P46091 355 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 CRISP3P54108 245 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 NFE2L1Q14494 772 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 PTGES3Q15185 160 aaKnown RBP13.73□□□□□ -0.21
HIF3A-202ENST00000244303 SOWAHCQ53LP3 525 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-202ENST00000244303 TCEAL5Q5H9L2 206 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 USP43Q70EL4 1123 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 DSG4Q86SJ6 1040 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 SLC22A16Q86VW1 577 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 ARMC8Q8IUR7 673 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 NLGN4XQ8N0W4 816 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 NUS1Q96E22 293 aa13.73□□□□□ -0.21
HIF3A-202ENST00000244303 MTERF3Q96E29 417 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms