RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 FURINP09958 794 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 SLC35G6P0C7Q6 338 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 HOXB9P17482 250 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-201ENST00000238688 DDCP20711 480 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 PSMA4P25789 261 aaKnown RBP12.56□□□□□ -0.4
SLIRP-201ENST00000238688 PTDSS1P48651 473 aaKnown RBP12.56□□□□□ -0.4
SLIRP-201ENST00000238688 DGKQP52824 942 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 MAPK12P53778 367 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 EPHA4P54764 986 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 KLC1Q07866 573 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 GPR18Q14330 331 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 RTP5Q14D33 572 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 CCNYL2Q5T2Q4 361 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 TRIM40Q6P9F5 258 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 LRRC74BQ6ZQY2 392 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 ADCK2Q7Z695 626 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 SAMD14Q8IZD0 417 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-201ENST00000238688 PQLC1Q8N2U9 271 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 ANKRD53Q8N9V6 530 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 OR2L5Q8NG80 312 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 OR4E2Q8NGC2 313 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 DNAJB14Q8TBM8 379 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 CREB3L4Q8TEY5 395 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 C16orf78Q8WTQ4 265 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 ZDHHC1Q8WTX9 485 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 GAL3ST3Q96A11 431 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 PPCDCQ96CD2 204 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 LRRC61Q9BV99 259 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 SPNS1Q9H2V7 528 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 OR51B5Q9H339 312 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 YY1AP1Q9H869 796 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 GORASP2Q9H8Y8 452 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 SLC6A20Q9NP91 592 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-201ENST00000238688 ATRXP46100 2492 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 FASNP49327 2511 aaKnown RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 A0A0J9YY10 115 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 PLPP1O14494 284 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 CASC3O15234 703 aaKnown RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 ZSCAN9O15535 394 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 ANP32DO95626 131 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 GPX2P18283 190 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 IL10P22301 178 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 PSMB5P28074 263 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 PTPN6P29350 595 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 PEBP1P30086 187 aaKnown RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 BSGP35613 385 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 GRIA3P42263 894 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 SKP1P63208 163 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 DAB2P98082 770 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 MS4A2Q01362 244 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 HHEXQ03014 270 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 FADDQ13158 208 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 MLC1Q15049 377 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 PGS1Q32NB8 556 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 PRRT3Q5FWE3 981 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 ARMC6Q6NXE6 501 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 SPESP1Q6UW49 350 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 SPATA24Q86W54 205 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 C17orf82Q86X59 251 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 SLC30A8Q8IWU4 369 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 EID3Q8N140 333 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 NAGSQ8N159 534 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 CAMKVQ8NCB2 501 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 ZNF740Q8NDX6 193 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 GPR156Q8NFN8 814 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 OR2T12Q8NG77 320 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 CCL4L1Q8NHW4 92 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 SLC37A2Q8TED4 501 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 REXO5Q96IC2 774 aaKnown RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 SLC45A3Q96JT2 553 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 PPM1MQ96MI6 270 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 PANX1Q96RD7 426 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 CPPED1Q9BRF8 314 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 SLC39A3Q9BRY0 314 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 EBPLQ9BY08 206 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 ZNF717Q9BY31 904 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 SLC6A16Q9GZN6 736 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 NRSN2Q9GZP1 204 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 RAB33BQ9H082 229 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 VCXQ9H320 206 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 XKR8Q9H6D3 395 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 KAT8Q9H7Z6 458 aaKnown RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 IL1RL2Q9HB29 575 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 MIEF1Q9NQG6 463 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 ACSS1Q9NUB1 689 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 LYARQ9NX58 379 aaKnown RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 ACTR10Q9NZ32 417 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 VAPAQ9P0L0 249 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 VPS4AQ9UN37 437 aa12.55□□□□□ -0.4
SLIRP-201ENST00000238688 NUP214P35658 2090 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-201ENST00000238688 A0A087WV48 116 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 OR5K3A6NET4 321 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 GABRR3A8MPY1 467 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 C9JVG2 144 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 H0Y3Z8 333 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 H0YJX3 145 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 ARPC2O15144 300 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms