RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 WDFY2Q96P53 400 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 DOHHQ9BU89 302 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 REXO4Q9GZR2 422 aaKnown RBP19.67■□□□□ 0.74
SNX3-201ENST00000230085 NUAK2Q9H093 628 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 ELOVL6Q9H5J4 265 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 C11orf16Q9NQ32 467 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 THSD1Q9NS62 852 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 EHD3Q9NZN3 535 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 THAP10Q9P2Z0 257 aaPredicted RBP19.67■□□□□ 0.74
SNX3-201ENST00000230085 PLXNB3Q9ULL4 1909 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 EFCAB10A6NFE3 127 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 SLC16A5O15375 505 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 MPZL2O60487 215 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 C8GP07360 202 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 DBTP11182 482 aaKnown RBP19.67■□□□□ 0.74
SNX3-201ENST00000230085 RCVRNP35243 200 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 WASP42768 502 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 SEPHS1P49903 392 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 CRYBA2P53672 197 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 MRPS21P82921 87 aaKnown RBP19.67■□□□□ 0.74
SNX3-201ENST00000230085 IL1RL1Q01638 556 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 SP140Q13342 867 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 GPR50Q13585 617 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 CDKN3Q16667 212 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 UGT8Q16880 541 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 VN1R5Q7Z5H4 357 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 ANKRD46Q86W74 232 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 RNF130Q86XS8 419 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 OR10Q1Q8NGQ4 319 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 RASSF5Q8WWW0 418 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 C11orf24Q96F05 449 aaPredicted RBP19.67■□□□□ 0.74
SNX3-201ENST00000230085 TSSK3Q96PN8 268 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 PANX1Q96RD7 426 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 TAPBPLQ9BX59 468 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 SLC12A9Q9BXP2 914 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.67■□□□□ 0.74
SNX3-201ENST00000230085 PRSS21Q9Y6M0 314 aa19.67■□□□□ 0.74
SNX3-201ENST00000230085 ANKRD34BA5PLL1 514 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 K7ERQ8 282 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 SUV39H1O43463 412 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 IL12RB1P42701 662 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 SLC15A1P46059 708 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 RPS5P46782 204 aaKnown RBP19.66■□□□□ 0.74
SNX3-201ENST00000230085 NEK2P51955 445 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 SGO1Q5FBB7 561 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 ARMCX4Q5H9R4 360 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 TSEN54Q7Z6J9 526 aaKnown RBP19.66■□□□□ 0.74
SNX3-201ENST00000230085 CCDC103Q8IW40 242 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 C1orf52Q8N6N3 182 aaKnown RBP19.66■□□□□ 0.74
SNX3-201ENST00000230085 ZNF366Q8N895 744 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 CAPSLQ8WWF8 208 aa19.66■□□□□ 0.74
SNX3-201ENST00000230085 RBMX2Q9Y388 322 aaKnown RBP19.66■□□□□ 0.74
SNX3-201ENST00000230085 C1orf226A1L170 272 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 IDH3BO43837 385 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 KLF8O95600 359 aaPredicted RBP19.65■□□□□ 0.74
SNX3-201ENST00000230085 HSD3B1P14060 373 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 ALOX12P18054 663 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 HSD3B2P26439 372 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 NR4A2P43354 598 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 CSNK1DP48730 415 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 FNDC3BQ53EP0 1204 aaKnown RBP19.65■□□□□ 0.74
SNX3-201ENST00000230085 ARMC12Q5T9G4 340 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 RSBN1Q5VWQ0 802 aaPredicted RBP19.65■□□□□ 0.74
SNX3-201ENST00000230085 FRG2Q64ET8 278 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 BMP8AQ7Z5Y6 402 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 ATCAYQ86WG3 371 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 RASGRP3Q8IV61 690 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 ERLEC1Q96DZ1 483 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 TRNT1Q96Q11 434 aaKnown RBP19.65■□□□□ 0.74
SNX3-201ENST00000230085 FRG2BQ96QU4 278 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 SLC30A2Q9BRI3 323 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 BOCQ9BWV1 1114 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 ASB8Q9H765 288 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 C2orf42Q9NWW7 574 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 ZNF226Q9NYT6 803 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 SLC25A13Q9UJS0 675 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 WBP11Q9Y2W2 641 aaKnown RBP19.65■□□□□ 0.74
SNX3-201ENST00000230085 N6AMT1Q9Y5N5 214 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 SRPRAP08240 638 aaKnown RBP19.65■□□□□ 0.74
SNX3-201ENST00000230085 MPC1LP0DKB6 136 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 HLA-EP13747 358 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 GTF2E2P29084 291 aaKnown RBP19.65■□□□□ 0.74
SNX3-201ENST00000230085 HMGA2P52926 109 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 CPSF6Q16630 551 aaKnown RBP eCLIP19.65■□□□□ 0.74
SNX3-201ENST00000230085 RNLSQ5VYX0 342 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 RETSATQ6NUM9 610 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 SERPINA13PQ6UXR4 307 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 ZNF605Q86T29 641 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 KRT73Q86Y46 540 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 NXPE1Q8N323 547 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 FAM181AQ8N9Y4 354 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 APIPQ96GX9 242 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 OR2A14Q96R47 310 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 LYSMD1Q96S90 227 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 CHRDQ9H2X0 955 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 TMEM245Q9H330 911 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 IL26Q9NPH9 171 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 HS3ST2Q9Y278 367 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 STON1Q9Y6Q2 735 aa19.65■□□□□ 0.74
SNX3-201ENST00000230085 CUL9Q8IWT3 2517 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms