RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 RSPRY1Q96DX4 576 aa20.98■□□□□ 0.95
SMARCD2-201ENST00000225742 NEURL3Q96EH8 262 aa20.98■□□□□ 0.95
SMARCD2-201ENST00000225742 TMEM245Q9H330 911 aa20.98■□□□□ 0.95
SMARCD2-201ENST00000225742 GIN1Q9NXP7 522 aa20.98■□□□□ 0.95
SMARCD2-201ENST00000225742 PRAMEF25A6NGN4 478 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 ANKDD1BA6NHY2 528 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 CACNB4O00305 520 aaPredicted RBP20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 MPZL2O60487 215 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 LCKP06239 509 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 OR1E2P47887 323 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 SAXO2Q658L1 398 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 FAM92BQ6ZTR7 304 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 PLD3Q8IV08 490 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 ZNF740Q8NDX6 193 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 SNRNP27Q8WVK2 155 aaKnown RBP20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 GGHQ92820 318 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 CRELD1Q96HD1 420 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 MROQ9BYG7 248 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 OSGIN1Q9UJX0 560 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 TDRKHQ9Y2W6 561 aaKnown RBP20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 PRAMEF33A0A0G2JMD5 474 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 TRBC2A0A5B9 178 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 EFCAB9A8MZ26 197 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 TLL1O43897 1013 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 PRAMEF10O60809 474 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 IFNW1P05000 195 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 TNFRSF1BP20333 461 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 CBLP22681 906 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 GAB4Q2WGN9 574 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 ZNF697Q5TEC3 545 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 OR5AR1Q8NGP9 310 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 OR5AK3PQ8NH89 298 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 C9orf43Q8TAL5 461 aaPredicted RBP20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 TFGQ92734 400 aaPredicted RBP20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 COL21A1Q96P44 957 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 MS4A8Q9BY19 250 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 ZNF226Q9NYT6 803 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 ZNF451Q9Y4E5 1061 aa20.97■□□□□ 0.95
SMARCD2-201ENST00000225742 TCF20Q9UGU0 1960 aaKnown RBP20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 FUOMA2VDF0 154 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 SH3D21A4FU49 640 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 CAPN5O15484 640 aaPredicted RBP20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 PDE9AO76083 593 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 GADD45GO95257 159 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 BCAP31P51572 246 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 CASP9P55211 416 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 NCS1P62166 190 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 REEP5Q00765 189 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 ATP1A4Q13733 1029 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 ZNF234Q14588 700 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 HEPACAMQ14CZ8 416 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 LRRTM4Q86VH4 590 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 MFSD4AQ8N468 514 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 LMNTD1Q8N9Z9 388 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 OR52J3Q8NH60 311 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 OR5K2Q8NHB8 316 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 ZHX1-C8orf76Q96EF9 292 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 IL17FQ96PD4 163 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 NIPSNAP1Q9BPW8 284 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 CXorf36Q9H7Y0 433 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 NEUROD4Q9HD90 331 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 RLIMQ9NVW2 624 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 KCND3Q9UK17 655 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 ADAM29Q9UKF5 820 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 RAB23Q9ULC3 237 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 A3GALT2U3KPV4 340 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 BRCA2P51587 3418 aa20.96■□□□□ 0.95
SMARCD2-201ENST00000225742 C5orf58C9J3I9 102 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 PLPP1O14494 284 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 CCR8P51685 355 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 MAPK12P53778 367 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 LSM3P62310 102 aaKnown RBP20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 TRIM16LQ309B1 348 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 EGFLAMQ63HQ2 1017 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 Q6ZPB1 254 aaPredicted RBP20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 SMPDL3AQ92484 453 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 TM4SF18Q96CE8 201 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 ALPK1Q96QP1 1244 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 IMPAD1Q9NX62 359 aa20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 CXXC1Q9P0U4 656 aaPredicted RBP20.95■□□□□ 0.94
SMARCD2-201ENST00000225742 C5orf67F2Z3F1 127 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 PLK4O00444 970 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 PDPK1O15530 556 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 FUCA1P04066 466 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 BSGP35613 385 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 SLC19A1P41440 591 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 VIPR2P41587 438 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 CTSKP43235 329 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 CDC42P60953 191 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 OXA1LQ15070 435 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 PNCKQ6P2M8 343 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 PHOSPHO2Q8TCD6 241 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 SUSD6Q92537 303 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 DACH2Q96NX9 599 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 ZNF717Q9BY31 904 aaPredicted RBP20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 SLIRPQ9GZT3 109 aaKnown RBP20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 DUSP12Q9UNI6 340 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 TMEM98Q9Y2Y6 226 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 PMF1-BGLAPU3KQ54 211 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 EFCAB10A6NFE3 127 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms