RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 RCVRNP35243 200 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 CASP3P42574 277 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 LIMS1P48059 325 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 CRB2Q5IJ48 1285 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 DEPDC1Q5TB30 811 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 BRAT1Q6PJG6 821 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 KLHL17Q6TDP4 642 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 SPATC1Q76KD6 591 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 SLC7A5P1Q8MH63 180 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 WDR36Q8NI36 951 aaKnown RBP16.51■□□□□ 0.23
USB1-201ENST00000219281 C9orf43Q8TAL5 461 aaPredicted RBP16.51■□□□□ 0.23
USB1-201ENST00000219281 C16orf78Q8WTQ4 265 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 BTN2A2Q8WVV5 523 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 FOPNLQ96NB1 174 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 CTRCQ99895 268 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 CDCA4Q9BXL8 241 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 NEDD8-MDP1E9PL57 170 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 PSMD11O00231 422 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CTDSP2O14595 271 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 LEFTY1O75610 366 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CBLP22681 906 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CHMP24386 653 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CNR2P34972 360 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 RECQLP46063 649 aaPredicted RBP16.5■□□□□ 0.23
USB1-201ENST00000219281 TAS2R50P59544 299 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 DCDC1P59894 354 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 TBPL1P62380 186 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 MEF2AQ02078 507 aaPredicted RBP16.5■□□□□ 0.23
USB1-201ENST00000219281 STARD3Q14849 445 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 POM121L1PQ3SYA9 428 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 SPANXN2Q5MJ10 180 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 TMEM220Q6QAJ8 160 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CELF2-AS1Q8N7Q2 184 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 KREMEN2Q8NCW0 462 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 ZNF480Q8WV37 535 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 REPS1Q96D71 796 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 VPS35Q96QK1 796 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 MAPKAP1Q9BPZ7 522 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 ZSCAN5AQ9BUG6 496 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 HOXD1Q9GZZ0 328 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 NUAK2Q9H093 628 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 NMNAT1Q9HAN9 279 aaPredicted RBP16.5■□□□□ 0.23
USB1-201ENST00000219281 HCFC1R1Q9NWW0 138 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CLN6Q9NWW5 311 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 MKLN1Q9UL63 735 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CCL26Q9Y258 94 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 ENPP4Q9Y6X5 453 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 PTPRSQ13332 1948 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 DENND4CQ5VZ89 1909 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 FAM227AF5H4B4 570 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CCRL2O00421 344 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 ARHGAP33O14559 1287 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 KLHL18O94889 574 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 IFNA14P01570 189 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 PIK3CBP42338 1070 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 NR4A2P43354 598 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 HMGA2P52926 109 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CRISP1P54107 249 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 ERVFC1P60507 584 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 TMEM115Q12893 351 aaPredicted RBP16.5■□□□□ 0.23
USB1-201ENST00000219281 SF3B4Q15427 424 aaKnown RBP eCLIP16.5■□□□□ 0.234e-17■■■■■ 82.4
USB1-201ENST00000219281 ZNF630Q2M218 657 aaPredicted RBP16.5■□□□□ 0.23
USB1-201ENST00000219281 ZNF284Q2VY69 593 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 ARSIQ5FYB1 569 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 ATCAYQ86WG3 371 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 WRAP53Q9BUR4 548 aaKnown RBP16.5■□□□□ 0.23
USB1-201ENST00000219281 C14orf119Q9NWQ9 140 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 TAS2R9Q9NYW1 312 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 FTSJ1Q9UET6 329 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 KIAA1671Q9BY89 1806 aa16.5■□□□□ 0.23
USB1-201ENST00000219281 CXorf51AA0A1B0GTR3 108 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 PNMA8CA0A1B0GUJ8 204 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 ZAR1LA6NP61 321 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 QSOX1O00391 747 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 DYRK3O43781 588 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 SSX4O60224 188 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 KLK1P06870 262 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 NPPBP16860 134 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 PRLHRP49683 370 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 DEFA1P59665 94 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 DEFA3P59666 94 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 PDE7AQ13946 482 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 SSX1Q16384 188 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 FRMPD2BQ6IN97 320 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 FAM180BQ6P0A1 224 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 CCDC190Q86UF4 302 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 Q8N9G6 341 aaPredicted RBP16.49■□□□□ 0.23
USB1-201ENST00000219281 GLYATL1Q969I3 302 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 SDHCQ99643 169 aaPredicted RBP16.49■□□□□ 0.23
USB1-201ENST00000219281 FAM83CQ9BQN1 747 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 DMRT3Q9NQL9 472 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 ERVK13-1Q9NX77 482 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 CNOT2Q9NZN8 540 aaKnown RBP16.49■□□□□ 0.23
USB1-201ENST00000219281 A0A1W2PRB8 838 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 SH3D21A4FU49 640 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 CARNS1A5YM72 827 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 CCL16O15467 120 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 GPX5O75715 221 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 C1orf105O95561 183 aa16.49■□□□□ 0.23
USB1-201ENST00000219281 ARAFP10398 606 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms