RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ICKQ9UPZ9 632 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 TSC22D4Q9Y3Q8 395 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 DSPPQ9NZW4 1301 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 A0A075B6Q4 140 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 M0R129 80 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 KLHL18O94889 574 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 POU2F1P14859 743 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 GTF2E2P29084 291 aaKnown RBP12.71□□□□□ -0.37
SRP54-201ENST00000216774 MED22Q15528 200 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 DEPDC1Q5TB30 811 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 DESI1Q6ICB0 168 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 NRSN1Q8IZ57 195 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 OR5AK3PQ8NH89 298 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 HCAR2Q8TDS4 363 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 AP2M1Q96CW1 435 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 OR5M11Q96RB7 305 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 YME1L1Q96TA2 773 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 CTRCQ99895 268 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 RACGAP1Q9H0H5 632 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 OR51B5Q9H339 312 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 TRIM39Q9HCM9 518 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 ITM2CQ9NQX7 267 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 CRNNQ9UBG3 495 aaPredicted RBP12.71□□□□□ -0.37
SRP54-201ENST00000216774 CCL26Q9Y258 94 aa12.71□□□□□ -0.37
SRP54-201ENST00000216774 ADAP00813 363 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 TGFB1P01137 390 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 GNRH1P01148 92 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 GASTP01350 101 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 GSTT2P0CG29 244 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 GSTT2BP0CG30 244 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 SPNP16150 400 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 UQCRC2P22695 453 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 MMP12P39900 470 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 PCYT1AP49585 367 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 DSTNP60981 165 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 SNRPGP62308 76 aaKnown RBP12.71□□□□□ -0.38
SRP54-201ENST00000216774 GANABQ14697 944 aaKnown RBP12.71□□□□□ -0.38
SRP54-201ENST00000216774 TSTQ16762 297 aaKnown RBP12.71□□□□□ -0.38
SRP54-201ENST00000216774 CYP27C1Q4G0S4 372 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 BCL7AQ4VC05 210 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 CCDC92Q53HC0 331 aaPredicted RBP12.71□□□□□ -0.38
SRP54-201ENST00000216774 ZNF805Q5CZA5 627 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 REEP3Q6NUK4 255 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 CNKSR3Q6P9H4 555 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 NXPE4Q6UWF7 544 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 CCDC149Q6ZUS6 474 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 TAGAPQ8N103 731 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 FLCNQ8NFG4 579 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 SLC5A11Q8WWX8 675 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 IRF7Q92985 503 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 UBE2E3Q969T4 207 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 LRIG1Q96JA1 1093 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 NUAK2Q9H093 628 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 NMNAT1Q9HAN9 279 aaPredicted RBP12.71□□□□□ -0.38
SRP54-201ENST00000216774 C3orf14Q9HBI5 128 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 MOV10Q9HCE1 1003 aaKnown RBP12.71□□□□□ -0.38
SRP54-201ENST00000216774 FZD3Q9NPG1 666 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 TAS2R16Q9NYV7 291 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 IL36AQ9UHA7 158 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 SLC6A14Q9UN76 642 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 SH2B3Q9UQQ2 575 aa12.71□□□□□ -0.38
SRP54-201ENST00000216774 PCM1Q15154 2024 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 SAP18O00422 153 aaKnown RBP12.7□□□□□ -0.38
SRP54-201ENST00000216774 ARHGAP33O14559 1287 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 KMOO15229 486 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 DYRK3O43781 588 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 RECKO95980 971 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 APOA1P02647 267 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 RB1P06400 928 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 KLK1P06870 262 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 ELFN1P0C7U0 828 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 TYRP14679 529 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 PBLDP30039 288 aaPredicted RBP12.7□□□□□ -0.38
SRP54-201ENST00000216774 CNR2P34972 360 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 SOAT1P35610 550 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 RHAGQ02094 409 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 STARD3Q14849 445 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 LRIT3Q3SXY7 679 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 MEDAGQ5VYS4 303 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 KRT73Q86Y46 540 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 OR9A1PQ8NGU1 263 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 WDR36Q8NI36 951 aaKnown RBP12.7□□□□□ -0.38
SRP54-201ENST00000216774 APOBEC4Q8WW27 367 aaKnown RBP12.7□□□□□ -0.38
SRP54-201ENST00000216774 PDXPQ96GD0 296 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 PPP1R16AQ96I34 528 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 NLNQ9BYT8 704 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 SLC25A19Q9HC21 320 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 ASAH2Q9NR71 780 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 EHD3Q9NZN3 535 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 NDOR1Q9UHB4 597 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 OGDHLQ9ULD0 1010 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 HELZP42694 1942 aaKnown RBP12.7□□□□□ -0.38
SRP54-201ENST00000216774 ALPK3Q96L96 1907 aa12.7□□□□□ -0.38
SRP54-201ENST00000216774 SCG5P05408 212 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 CTSLP07711 333 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 TIE1P35590 1138 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 NNMTP40261 264 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 ATN1P54259 1190 aaPredicted RBP12.69□□□□□ -0.38
SRP54-201ENST00000216774 TMEM215Q68D42 235 aa12.69□□□□□ -0.38
SRP54-201ENST00000216774 ERAP2Q6P179 960 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms