RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CHRM5P08912 532 aaPredicted RBP28.25■■■□□ 2.11
PABPN1-201ENST00000216727 DRD2P14416 443 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 AQP1P29972 269 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 ACTR1BP42025 376 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 RXRGP48443 463 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 ALDH3B2P48448 385 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 MANFP55145 182 aaKnown RBP28.25■■■□□ 2.11
PABPN1-201ENST00000216727 ACTR1AP61163 376 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 HYAL2Q12891 473 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 C17orf62Q9BQA9 187 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 TMEM168Q9H0V1 697 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 TEX10Q9NXF1 929 aaPredicted RBP28.25■■■□□ 2.11
PABPN1-201ENST00000216727 TMEFF2Q9UIK5 374 aaPredicted RBP28.25■■■□□ 2.11
PABPN1-201ENST00000216727 PNMA8BQ9ULN7 279 aaPredicted RBP28.25■■■□□ 2.11
PABPN1-201ENST00000216727 MYO10Q9HD67 2058 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 HS6ST1O60243 411 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 FPR1P21462 350 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 PRKACGP22612 351 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 CASP9P55211 416 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 SRP54P61011 504 aaKnown RBP28.24■■■□□ 2.11
PABPN1-201ENST00000216727 PLCL1Q15111 1095 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 DCP2Q8IU60 420 aaKnown RBP28.24■■■□□ 2.11
PABPN1-201ENST00000216727 SLC30A8Q8IWU4 369 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 ZNF555Q8NEP9 628 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 CCL4L1Q8NHW4 92 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 ADAMTS16Q8TE57 1224 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 HMGB4Q8WW32 186 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 MS4A6EQ96DS6 147 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 NEURL3Q96EH8 262 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 AMBRA1Q9C0C7 1298 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 RBM38Q9H0Z9 239 aaKnown RBP28.24■■■□□ 2.11
PABPN1-201ENST00000216727 ACSS1Q9NUB1 689 aaPredicted RBP28.24■■■□□ 2.11
PABPN1-201ENST00000216727 EHD3Q9NZN3 535 aa28.24■■■□□ 2.11
PABPN1-201ENST00000216727 ARAFP10398 606 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 RAD23AP54725 363 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 CDK6Q00534 326 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 TFF2Q03403 129 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 KIAA1614Q5VZ46 1190 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 SAXO2Q658L1 398 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 ZNF793Q6ZN11 406 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 AMER3Q8N944 861 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 MFSD9Q8NBP5 474 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 OR4E2Q8NGC2 313 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 NCSTNQ92542 709 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 ZBED6CLQ96FA7 236 aaPredicted RBP28.23■■■□□ 2.11
PABPN1-201ENST00000216727 TTYH1Q9H313 450 aaPredicted RBP28.23■■■□□ 2.11
PABPN1-201ENST00000216727 PCDHGA4Q9Y5G9 962 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 NARSO43776 548 aaKnown RBP28.23■■■□□ 2.11
PABPN1-201ENST00000216727 IGLV3-19P01714 112 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 IGFBP4P22692 258 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 MLC1Q15049 377 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 ALG11Q2TAA5 492 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 ANKRD34AQ69YU3 496 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 SLC30A9Q6PML9 568 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 NFKBIDQ8NI38 313 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 KLHL31Q9H511 634 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 ORC6Q9Y5N6 252 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 SNX8Q9Y5X2 465 aa28.23■■■□□ 2.11
PABPN1-201ENST00000216727 ISM1B1AKI9 464 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 PPM1DO15297 605 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 RASGRP1O95267 797 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 ASGR2P07307 311 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 F3P13726 295 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 KCNAB2Q13303 367 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 CRB2Q5IJ48 1285 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 FAM180BQ6P0A1 224 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 RBM44Q6ZP01 1051 aaKnown RBP28.22■■■□□ 2.11
PABPN1-201ENST00000216727 CEP68Q76N32 757 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 THAP5Q7Z6K1 395 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 PSMA8Q8TAA3 256 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 KCNC2Q96PR1 638 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 TWSG1Q9GZX9 223 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 PCDHGA2Q9Y5H1 932 aa28.22■■■□□ 2.11
PABPN1-201ENST00000216727 HOXB3P14651 431 aaPredicted RBP28.21■■■□□ 2.11
PABPN1-201ENST00000216727 SLC19A1P41440 591 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 CDH15P55291 814 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 ABHD17CQ6PCB6 329 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 C8orf59Q8N0T1 100 aaPredicted RBP28.21■■■□□ 2.11
PABPN1-201ENST00000216727 OR2L5Q8NG80 312 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 JPH3Q8WXH2 748 aaPredicted RBP28.21■■■□□ 2.11
PABPN1-201ENST00000216727 SLC22A18Q96BI1 424 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 FAIM2Q9BWQ8 316 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 CD72P21854 359 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 TSFMP43897 325 aaKnown RBP28.21■■■□□ 2.11
PABPN1-201ENST00000216727 PCBP3P57721 371 aaKnown RBP28.21■■■□□ 2.11
PABPN1-201ENST00000216727 DSTNP60981 165 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 SLC9A5Q14940 896 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 NDUFAF5Q5TEU4 345 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 Q6ZSR6 202 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 SRFBP1Q8NEF9 429 aaKnown RBP28.21■■■□□ 2.11
PABPN1-201ENST00000216727 EXOSC8Q96B26 276 aaKnown RBP28.21■■■□□ 2.11
PABPN1-201ENST00000216727 TMEM121BQ9BXQ6 578 aaPredicted RBP28.21■■■□□ 2.11
PABPN1-201ENST00000216727 REEP1Q9H902 201 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 PRDM7Q9NQW5 492 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 DMTF1Q9Y222 760 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 DGKBQ9Y6T7 804 aa28.21■■■□□ 2.11
PABPN1-201ENST00000216727 SNRNP200O75643 2136 aaKnown RBP28.2■■■□□ 2.11
PABPN1-201ENST00000216727 A0A0G2JN53 185 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 MYO1GB0I1T2 1018 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 VILLO15195 856 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms