RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 C3P01027 1663 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Coq10aE9Q3H6 259 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 S100a11P50543 98 aaKnown RBP9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tmem102Q3UPR7 509 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm1587Q3UT80 123 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tmub2Q3V209 319 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Efemp1Q8BPB5 493 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pamr1Q8BU25 720 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Phf11aQ8BVM9 293 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Fam118aQ91YN1 357 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Sult1b1Q9QWG7 299 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Plag1Q9QYE0 499 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Myo5bP21271 1818 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zfp981A2A8V7 445 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm14085A2AWR5 660 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 B3galt2O54905 422 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 EpxP49290 716 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc30a3P97441 388 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 SobpQ0P5V2 864 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ephx3Q3V1F8 367 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr667Q7TRP4 326 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Itln1bQ80ZA0 313 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mfsd8Q8BH31 519 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Smyd4Q8BTK5 799 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tmem135Q9CYV5 458 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Bace2Q9JL18 514 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zfp978A2A7I1 335 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 TroapB7ZNG4 668 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm17535J3KMR8 224 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Vmn2r112L7N221 857 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr6P34986 316 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Kat7Q5SVQ0 613 aaKnown RBP9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Polr2mQ6P6I6 366 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pnma8aQ80VM8 430 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tram1Q91V04 374 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Atg12Q9CQY1 141 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 D10Wsu102eQ9CX66 185 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lpcat2bQ9D5U0 516 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 PirQ9D711 290 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tvp23bQ9D8T4 205 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ppef1O35655 650 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Alox8O35936 677 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 BckdkO55028 412 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 PnmtP40935 295 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tm9sf2P58021 662 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Dennd1bQ3U1T9 766 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 EdnraQ61614 427 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 CochQ62507 552 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rps27lQ6ZWY3 84 aaKnown RBP9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tm7sf2Q71KT5 418 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zc3hc1Q80YV2 501 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Thumpd1Q99J36 350 aaKnown RBP9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Plekhj1Q9D240 164 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Fam69aQ9D6I7 428 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rnf138rt1Q9D9M9 248 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 H2-BlV9GXR0 257 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Nav1Q8CH77 1875 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Wscd2D4PHA7 571 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 AU018091E9PWS4 684 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 ThP24529 498 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mgat5bQ765H6 792 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc30a6Q8BJM5 460 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cadm2Q8BLQ9 435 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 PvrQ8K094 408 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1276Q8VF40 312 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Npffr2Q924H0 417 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 GrifinQ9D1U0 144 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cdc40Q9DC48 579 aaKnown RBP9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Myh6Q02566 1938 aaKnown RBP9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lama4P97927 1816 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Btnl2O70355 454 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Esr1P19785 599 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 DmpkP54265 631 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Alox12eP55249 662 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cdh11P55288 796 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pdss2Q33DR3 401 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mier2Q3U3N0 541 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc2a6Q3UDF0 497 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 BB287469Q3UT53 144 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pcbp2Q61990 362 aaKnown RBP9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cfap97Q6ZPR1 541 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Syt14Q7TN84 555 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rpp38Q80UU2 280 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Wdtc1Q80ZK9 677 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tgm4Q8BZH1 670 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Dnajc22Q8CHS2 339 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pink1Q99MQ3 580 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Asb12Q9D738 308 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rnf225Q9D7D1 332 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Med27Q9DB40 311 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Myh7Q91Z83 1935 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Abcb1aP21447 1276 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tbx5P70326 518 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rps5P97461 204 aaKnown RBP9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Kcna7Q17ST2 489 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Trappc13Q3TIR1 417 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Snx33Q4VAA7 574 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tm4sf1Q64302 202 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Carns1Q6ZPS2 827 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc34a3Q80SU6 601 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms