RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 DPP3Q9NY33 737 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 C1RLQ9NZP8 487 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 RHCGQ9UBD6 479 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 SNX7Q9UNH6 387 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 KCNJ14Q9UNX9 436 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 GRIP1Q9Y3R0 1128 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 PHLPP2Q6ZVD8 1323 aa2.34□□□□□ -2.04
SMARCB1-208ENST00000634926 ASCC3Q8N3C0 2202 aaKnown RBP2.34□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF462Q96JM2 2506 aa2.34□□□□□ -2.04
SMARCB1-208ENST00000634926 LRBAP50851 2863 aa2.34□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF638Q14966 1978 aaKnown RBP2.34□□□□□ -2.04
SMARCB1-208ENST00000634926 PTPN13Q12923 2485 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 AKAP9Q99996 3911 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 TCHHQ07283 1943 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 CELSR1Q9NYQ6 3014 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 A0A1B0GVT2 93 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 BICDL2A1A5D9 508 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 MYBPHLA2RUH7 354 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 A4D1N5 150 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 TRIM64A6NGJ6 449 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 CASTOR2A6NHX0 329 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 TRIM64BA6NI03 449 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 CLDN4O14493 209 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 CCL16O15467 120 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 BUD23O43709 281 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 OR10H2O60403 315 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 NEMFO60524 1076 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 KINO60870 393 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SERPINI2O75830 405 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PRAMEF12O95522 483 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 LDLRP01130 860 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM58BPP0C7Q3 252 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 KCNE1P15382 129 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 S1PR1P21453 382 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 RPA1P27694 616 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 CDC25AP30304 524 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PRKCIP41743 596 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 NAMPTP43490 491 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 OR1G1P47890 313 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC9A3P48764 834 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PDLIM4P50479 330 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ALDH3A2P51648 485 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PDE1BQ01064 536 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 MZT1Q08AG7 82 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ELAVL2Q12926 359 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 TRAF2Q12933 501 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ORC2Q13416 577 aaPredicted RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 NFE2L1Q14494 772 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF674Q2M3X9 581 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 DCAF4L1Q3SXM0 396 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ANKRD20A4Q4UJ75 823 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 TDRD12Q587J7 1177 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ANKRD20A8PQ5CZ79 823 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 XKR9Q5GH70 373 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM78AQ5JUQ0 283 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ANKRD20A2Q5SQ80 823 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 GCNT6Q5T4J0 391 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 LIN9Q5TKA1 542 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ANKRD20A1Q5TYW2 823 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ANKRD20A3Q5VUR7 823 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SHEQ5VZ18 495 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM91A1Q658Y4 838 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PRR27Q6MZM9 219 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 BLOC1S2Q6QNY1 142 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 CCNI2Q6ZMN8 369 aaPredicted RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 Q6ZS52 159 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 OTOAQ7RTW8 1153 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SPATA21Q7Z572 469 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 TMEM150AQ86TG1 271 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 CATSPER3Q86XQ3 398 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SPEM1Q8N4L4 309 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 C1orf52Q8N6N3 182 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 C4orf32Q8N8J7 132 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC4A11Q8NBS3 891 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ATAD1Q8NBU5 361 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 OR2AJ1Q8NGZ0 328 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 OR14A16Q8NHC5 309 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 OCC1Q8TAD7 63 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF461Q8TAF7 563 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PPP4R1Q8TF05 950 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 LRRC15Q8TF66 581 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC44A1Q8WWI5 657 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SMPDL3BQ92485 455 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PIGTQ969N2 578 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SPDL1Q96EA4 605 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 TCEAL4Q96EI5 215 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 MSANTD3Q96H12 275 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM81BQ96LP2 452 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 INTS14Q96SY0 518 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 FEVQ99581 238 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PKMYT1Q99640 499 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 INPP5KQ9BT40 448 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 LMF2Q9BU23 707 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 POLR3CQ9BUI4 534 aaPredicted RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 DCLK3Q9C098 648 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 RBM38Q9H0Z9 239 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SEMA6AQ9H2E6 1030 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF334Q9HCZ1 680 aaPredicted RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 TUFT1Q9NNX1 390 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms