RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	SCUBE1	Q8IWY4	988 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	PDIK1L	Q8N165	341 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	CYP4Z2P	Q8N1L4	340 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	TRPV3	Q8NET8	790 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	B3GNT7	Q8NFL0	401 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	PHF10	Q8WUB8	498 aa	Known RBP	11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	NCLN	Q969V3	563 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	GAL3ST3	Q96A11	431 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	TMEM125	Q96AQ2	219 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	PDLIM5	Q96HC4	596 aa	Known RBP	11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	TMEM79	Q9BSE2	394 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	GPAM	Q9HCL2	828 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	PRTFDC1	Q9NRG1	225 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	SMYD2	Q9NRG4	433 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	DEPP	Q9NTK1	212 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	FBXW2	Q9UKT8	454 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	PPT2	Q9UMR5	302 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	OARD1	Q9Y530	152 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	MPDZ	O75970	2070 aa		11.28	□□□□□ -0.6
SOX2-OT-256	ENST00000630482	URAD	A6NGE7	173 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482		E9PLN8	166 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	PRRG2	O14669	202 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	TP73	O15350	636 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	ERI3	O43414	337 aa	Known RBP	11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	PEX1	O43933	1283 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	PRAMEF4	O60810	478 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	PDE9A	O76083	593 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	TFEB	P19484	476 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CERS1	P27544	350 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	GMPR	P36959	345 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	SLC6A12	P48065	614 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CLCN2	P51788	898 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	RAB38	P57729	211 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	MORF4L2	Q15014	288 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	PRAMEF9	Q5VWM5	478 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	SLCO4C1	Q6ZQN7	724 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	FRA10AC1	Q70Z53	315 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	VN1R5	Q7Z5H4	357 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	ARMC10	Q8N2F6	343 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	SPATA6L	Q8N4H0	392 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	FBXO36	Q8NEA4	188 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	OR52N2	Q8NGI0	321 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	FAM57A	Q8TBR7	257 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	ESAM	Q96AP7	390 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	RHBDF1	Q96CC6	855 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	MS4A6E	Q96DS6	147 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	QRFPR	Q96P65	431 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	VKORC1	Q9BQB6	163 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	TRIM31	Q9BZY9	425 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CAB39L	Q9H9S4	337 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	KCMF1	Q9P0J7	381 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	MMACHC	Q9Y4U1	282 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	KCNE2	Q9Y6J6	123 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	HIVEP1	P15822	2718 aa		11.27	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	NKX2-6	A6NCS4	301 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	LRIT2	A6NDA9	550 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	TMEM200C	A6NKL6	621 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	FAM90A27P	A6NNH2	459 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	USP27X	A6NNY8	438 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482		G3V3Y1	287 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CES2	O00748	559 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	TAPBP	O15533	448 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	C1GALT1C1L	P0DN25	315 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	PTGS2	P35354	604 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	GPR143	P51810	404 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	PLA2G16	P53816	162 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	MRPS25	P82663	173 aa	Known RBP	11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CDKL1	Q00532	357 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	TLE4	Q04727	773 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	MGAT5	Q09328	741 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	PDIA2	Q13087	525 aa	Known RBP	11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	SLC13A2	Q13183	592 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	MEX3B	Q6ZN04	569 aa	Known RBP	11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CEP128	Q6ZU80	1094 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	KLHDC8A	Q8IYD2	350 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	NKAP	Q8N5F7	415 aa	Known RBP	11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	TMEM156	Q8N614	296 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	ZNF321P	Q8N8H1	164 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	POGLUT1	Q8NBL1	392 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	ARMC2	Q8NEN0	867 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	C16orf52	Q8NHV5	167 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CA5BP1	Q8WTZ4	195 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	VMP1	Q96GC9	406 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	VPS39	Q96JC1	886 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CTNNAL1	Q9UBT7	734 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	LIPG	Q9Y5X9	500 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	MED12	Q93074	2177 aa		11.26	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	FAM166B	A8MTA8	275 aa		11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	PHGDH	O43175	533 aa	Known RBP	11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	ZNF354A	O60765	605 aa	Predicted RBP	11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	OR2J2	O76002	312 aa		11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	SEC31A	O94979	1220 aa	Known RBP	11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	OR6B1	O95007	311 aa		11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	WISP3	O95389	354 aa	Predicted RBP	11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	TUBB4A	P04350	444 aa		11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	GNAZ	P19086	355 aa		11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CD22	P20273	847 aa		11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	SSTR2	P30874	369 aa		11.25	□□□□□ -0.61
SOX2-OT-256	ENST00000630482	CASQ1	P31415	396 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms