RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 NPIPA3F8WFD2 350 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 G3V3Y1 287 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 CDC7O00311 574 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 FANCGO15287 622 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 KLK8O60259 260 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 PRAMEF4O60810 478 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 OR2J2O76002 312 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 GLSO94925 669 aaPredicted RBP10.26□□□□□ -0.77
DDX41-218ENST00000625286 SERPINA6P08185 405 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 CELA3AP09093 270 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 CCDC175P0C221 793 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 PGAM1P18669 254 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 GDF5P43026 501 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 AP1S2P56377 157 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 IL2P60568 153 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 PPIAP62937 165 aaKnown RBP10.26□□□□□ -0.77
DDX41-218ENST00000625286 RGS1Q08116 209 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 SNTB1Q13884 538 aaKnown RBP10.26□□□□□ -0.77
DDX41-218ENST00000625286 RBBP5Q15291 538 aaKnown RBP10.26□□□□□ -0.77
DDX41-218ENST00000625286 ZNF750Q32MQ0 723 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 TEDDM1Q5T9Z0 273 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 HECTD2Q5U5R9 776 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 PRAMEF9Q5VWM5 478 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 TMEM211Q6ICI0 200 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 ADNP2Q6IQ32 1131 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 ARHGAP11AQ6P4F7 1023 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 TRMT10BQ6PF06 316 aaKnown RBP10.26□□□□□ -0.77
DDX41-218ENST00000625286 CCDC137Q6PK04 289 aaKnown RBP10.26□□□□□ -0.77
DDX41-218ENST00000625286 VN1R5Q7Z5H4 357 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 PALM2Q8IXS6 379 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 TMEM156Q8N614 296 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 PSD4Q8NDX1 1056 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 OR2M7Q8NG81 312 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 ASB5Q8WWX0 329 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 PWWP2AQ96N64 755 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 PELI2Q9HAT8 420 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 CLK4Q9HAZ1 481 aaKnown RBP10.26□□□□□ -0.77
DDX41-218ENST00000625286 KCNJ16Q9NPI9 418 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 SEMA4BQ9NPR2 832 aaPredicted RBP10.26□□□□□ -0.77
DDX41-218ENST00000625286 VWA7Q9Y334 891 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 NINQ8N4C6 2090 aa10.26□□□□□ -0.77
DDX41-218ENST00000625286 A0A0G2JNJ9 132 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 WWP2O00308 870 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 CYR61O00622 381 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 GLI4P10075 376 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 CD1EP15812 388 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 ADH7P40394 386 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 SOX3P41225 446 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 SSR4P51571 173 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 FOXO1Q12778 655 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 TERF2Q15554 542 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 HP1BP3Q5SSJ5 553 aaPredicted RBP10.25□□□□□ -0.77
DDX41-218ENST00000625286 IL20RBQ6UXL0 311 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 SLCO4C1Q6ZQN7 724 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 CLNKQ7Z7G1 428 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 TMPRSS11BQ86T26 416 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 PPIL6Q8IXY8 311 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.25□□□□□ -0.779e-7■■■■■ 51.2
DDX41-218ENST00000625286 EID3Q8N140 333 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 TRPV3Q8NET8 790 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 PTPMT1Q8WUK0 201 aaPredicted RBP10.25□□□□□ -0.77
DDX41-218ENST00000625286 MS4A6EQ96DS6 147 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 VMP1Q96GC9 406 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 PDLIM5Q96HC4 596 aaKnown RBP10.25□□□□□ -0.77
DDX41-218ENST00000625286 RASL10BQ96S79 203 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 CSF3RQ99062 836 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 TTYH2Q9BSA4 534 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 CNPPD1Q9BV87 410 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 TTTY12Q9BZ98 90 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 CXXC4Q9H2H0 198 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 ZNF358Q9NW07 568 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 MYOTQ9UBF9 498 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 Q9UFV3 132 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 KCNN3Q9UGI6 736 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 YARS2Q9Y2Z4 477 aaKnown RBP10.25□□□□□ -0.77
DDX41-218ENST00000625286 MMACHCQ9Y4U1 282 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 PSAT1Q9Y617 370 aa10.25□□□□□ -0.77
DDX41-218ENST00000625286 A0A1B0GVC2 190 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 LRIT2A6NDA9 550 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 USP27XA6NNY8 438 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 PSMD12O00232 456 aaPredicted RBP10.24□□□□□ -0.77
DDX41-218ENST00000625286 ZFAND5O76080 213 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 NADKO95544 446 aaPredicted RBP10.24□□□□□ -0.77
DDX41-218ENST00000625286 IGHG3P01860 377 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 TUBB4AP04350 444 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 ENDOUP21128 410 aaKnown RBP10.24□□□□□ -0.77
DDX41-218ENST00000625286 IVDP26440 423 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 MAGEA5P43359 124 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 HSD17B7P56937 341 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 PDAP1Q13442 181 aaKnown RBP10.24□□□□□ -0.77
DDX41-218ENST00000625286 ZNF460Q14592 562 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 NIPAL1Q6NVV3 410 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 GALNT7Q86SF2 657 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 TMEM200AQ86VY9 491 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 KLHDC8AQ8IYD2 350 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 TMEM251Q8N6I4 163 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 GPATCH11Q8N954 259 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 FAM47BQ8NA70 645 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 TRIM58Q8NG06 486 aa10.24□□□□□ -0.77
DDX41-218ENST00000625286 ANKRD49Q8WVL7 239 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms