RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 WNT3P56703 355 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 EEFSECP57772 596 aaKnown RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 OR1D5P58170 312 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 GPLD1P80108 840 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 PLIN5Q00G26 463 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 TRAP1Q12931 704 aaKnown RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 TRIM25Q14258 630 aaKnown RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 SLC9A5Q14940 896 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 NR1D2Q14995 579 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 SUZ12Q15022 739 aaKnown RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 RABL3Q5HYI8 236 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 LRIF1Q5T3J3 769 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 ANKRD26P1Q6NSI1 321 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 SLC23A3Q6PIS1 610 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 ZNF793Q6ZN11 406 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 ABHD13Q7L211 337 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 ANKRD46Q86W74 232 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 OR4N4Q8N0Y3 316 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 CARFQ8N187 725 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 RNF148Q8N7C7 305 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 ACOT4Q8N9L9 421 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 OR4C6Q8NH72 309 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 NCSTNQ92542 709 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 JADE3Q92613 823 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 ASB9Q96DX5 294 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 ZNF764Q96H86 408 aaPredicted RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 LOXL4Q96JB6 756 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 CCDC115Q96NT0 180 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 ANKRD27Q96NW4 1050 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 FCRL4Q96PJ5 515 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 GBP5Q96PP8 586 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 TEFMQ96QE5 360 aaKnown RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 CCDC3Q9BQI4 270 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 FAIM2Q9BWQ8 316 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 CHRNA10Q9GZZ6 450 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 PAIP1Q9H074 479 aaKnown RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 GAREM1Q9H706 876 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 SYNPO2LQ9H987 977 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 COPS7BQ9H9Q2 264 aaPredicted RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 PRDM7Q9NQW5 492 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 LYARQ9NX58 379 aaKnown RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.65□□□□□ -1.34
CBWD3-219ENST00000622817 BTNL2Q9UIR0 455 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 PACSIN3Q9UKS6 424 aa6.65□□□□□ -1.34
CBWD3-219ENST00000622817 IGHV1OR21-1A0A087WYE8 117 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TRBV5-3A0A0A0MS03 114 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 A0A0G2JN53 185 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 RNASET2O00584 256 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TXNDC9O14530 226 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 NVLO15381 856 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 DUX1O43812 170 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TMPRSS11DO60235 418 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SRPX2O60687 465 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PRAMEF10O60809 474 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 BCAS2O75934 225 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SORBS2O94875 1100 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SCELO95171 688 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ANP32DO95626 131 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 STAMBPO95630 424 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ATP6V1G2O95670 118 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ZNF888P0CJ79 500 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PNLIPP16233 465 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 RAB8AP61006 207 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 BTN3A2P78410 334 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PRR20EP86478 221 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PRR20CP86479 221 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PRR20DP86480 221 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PRR20BP86481 221 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PRR20AP86496 221 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MC1RQ01726 317 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 LIPEQ05469 1076 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 BNIP2Q12982 314 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SLAMF1Q13291 335 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 FLOT2Q14254 428 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 NR0B2Q15466 257 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 RUNDC3AQ59EK9 446 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TRIM61Q5EBN2 209 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 FRMPD2BQ6IN97 320 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 DNAJC14Q6Y2X3 702 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 FAM92BQ6ZTR7 304 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 GATAD2AQ86YP4 633 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TICAM1Q8IUC6 712 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PLXDC1Q8IUK5 500 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MCATQ8IVS2 390 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 DNAJC22Q8N4W6 341 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 CSNK1A1LQ8N752 337 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 FAM181AQ8N9Y4 354 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 FAM47BQ8NA70 645 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 KCT2Q8NC54 265 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 OR8K5Q8NH50 307 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 UTP15Q8TED0 518 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TGM7Q96PF1 710 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PANX1Q96RD7 426 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MAP3K3Q99759 626 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 INPP5KQ9BT40 448 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 THUMPD3Q9BV44 507 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MUC13Q9H3R2 512 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 FSCN3Q9NQT6 498 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PRDM9Q9NQV7 894 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SLC25A37Q9NYZ2 338 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms