RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 RAB7BQ96AH8 199 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 SLC6A16Q9GZN6 736 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 PELI2Q9HAT8 420 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 AKIP1Q9NQ31 210 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 DEC1Q9P2X7 70 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 PSORS1C1Q9UIG5 152 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 ACSL6Q9UKU0 697 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 ERGIC3Q9Y282 383 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 TESMINQ9Y4I5 508 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 HEPACAM2A8MVW5 462 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 PLK4O00444 970 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 PLPP1O14494 284 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 RECKO95980 971 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 OPN1SWP03999 348 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 DDCP20711 480 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 UQCRC2P22695 453 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 SERPINB1P30740 379 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 HSD17B2P37059 387 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 OPRL1P41146 370 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 RANBP1P43487 201 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 PRIM2P49643 509 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 TBC1D25Q3MII6 688 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 FAM78AQ5JUQ0 283 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 IER5LQ5T953 404 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 PLA2G15Q8NCC3 412 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 OR5AR1Q8NGP9 310 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 OR5K2Q8NHB8 316 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 DYNC2LI1Q8TCX1 351 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 APOBEC4Q8WW27 367 aaKnown RBP9.01□□□□□ -0.97
PDPN-212ENST00000621990 COX4I2Q96KJ9 171 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 PIP5K1AQ99755 562 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 BTBD2Q9BX70 525 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 FBXO8Q9NRD0 319 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 RASSF1Q9NS23 344 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 ACER3Q9NUN7 267 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 KCND3Q9UK17 655 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 ASF1AQ9Y294 204 aa9.01□□□□□ -0.97
PDPN-212ENST00000621990 C5orf42Q9H799 3197 aa9□□□□□ -0.97
PDPN-212ENST00000621990 CLDN25C9JDP6 229 aa9□□□□□ -0.97
PDPN-212ENST00000621990 FADS2O95864 444 aaKnown RBP9□□□□□ -0.97
PDPN-212ENST00000621990 IDUAP35475 653 aa9□□□□□ -0.97
PDPN-212ENST00000621990 GRK3P35626 688 aa9□□□□□ -0.97
PDPN-212ENST00000621990 CHI3L1P36222 383 aaPredicted RBP9□□□□□ -0.97
PDPN-212ENST00000621990 P2RY2P41231 377 aa9□□□□□ -0.97
PDPN-212ENST00000621990 FRKP42685 505 aaPredicted RBP9□□□□□ -0.97
PDPN-212ENST00000621990 FPGSQ05932 587 aa9□□□□□ -0.97
PDPN-212ENST00000621990 TBCEQ15813 527 aaPredicted RBP9□□□□□ -0.97
PDPN-212ENST00000621990 KHDRBS2Q5VWX1 349 aaKnown RBP9□□□□□ -0.97
PDPN-212ENST00000621990 METRNLQ641Q3 311 aa9□□□□□ -0.97
PDPN-212ENST00000621990 SAXO2Q658L1 398 aa9□□□□□ -0.97
PDPN-212ENST00000621990 GPR153Q6NV75 609 aa9□□□□□ -0.97
PDPN-212ENST00000621990 C16orf87Q6PH81 154 aa9□□□□□ -0.97
PDPN-212ENST00000621990 ANGPTL8Q6UXH0 198 aa9□□□□□ -0.97
PDPN-212ENST00000621990 AMZ2Q86W34 360 aa9□□□□□ -0.97
PDPN-212ENST00000621990 SFTPA1Q8IWL2 248 aa9□□□□□ -0.97
PDPN-212ENST00000621990 ADGRF3Q8IZF5 1079 aa9□□□□□ -0.97
PDPN-212ENST00000621990 DNAJC22Q8N4W6 341 aa9□□□□□ -0.97
PDPN-212ENST00000621990 NDNFQ8TB73 568 aa9□□□□□ -0.97
PDPN-212ENST00000621990 NEURL3Q96EH8 262 aa9□□□□□ -0.97
PDPN-212ENST00000621990 PDXPQ96GD0 296 aa9□□□□□ -0.97
PDPN-212ENST00000621990 ASB16Q96NS5 453 aa9□□□□□ -0.97
PDPN-212ENST00000621990 IL17FQ96PD4 163 aa9□□□□□ -0.97
PDPN-212ENST00000621990 KCNC2Q96PR1 638 aa9□□□□□ -0.97
PDPN-212ENST00000621990 PITHD1Q9GZP4 211 aaPredicted RBP9□□□□□ -0.97
PDPN-212ENST00000621990 NT5DC2Q9H857 520 aa9□□□□□ -0.97
PDPN-212ENST00000621990 A4GALTQ9NPC4 353 aa9□□□□□ -0.97
PDPN-212ENST00000621990 RLIMQ9NVW2 624 aa9□□□□□ -0.97
PDPN-212ENST00000621990 AHSPQ9NZD4 102 aa9□□□□□ -0.97
PDPN-212ENST00000621990 SPASTQ9UBP0 616 aa9□□□□□ -0.97
PDPN-212ENST00000621990 ANGPT4Q9Y264 503 aa9□□□□□ -0.97
PDPN-212ENST00000621990 MAP4K5Q9Y4K4 846 aa9□□□□□ -0.97
PDPN-212ENST00000621990 DNMT3AQ9Y6K1 912 aaPredicted RBP9□□□□□ -0.97
PDPN-212ENST00000621990 DGKBQ9Y6T7 804 aa9□□□□□ -0.97
PDPN-212ENST00000621990 C2orf16Q68DN1 1984 aa9□□□□□ -0.97
PDPN-212ENST00000621990 MYO7AQ13402 2215 aa9□□□□□ -0.97
PDPN-212ENST00000621990 PRAMEF33A0A0G2JMD5 474 aa9□□□□□ -0.97
PDPN-212ENST00000621990 J3QRK9 145 aa9□□□□□ -0.97
PDPN-212ENST00000621990 MAN1A2O60476 641 aa9□□□□□ -0.97
PDPN-212ENST00000621990 PRAMEF10O60809 474 aa9□□□□□ -0.97
PDPN-212ENST00000621990 TFPTP0C1Z6 253 aa9□□□□□ -0.97
PDPN-212ENST00000621990 TNFRSF1BP20333 461 aa9□□□□□ -0.97
PDPN-212ENST00000621990 NR4A1P22736 598 aa9□□□□□ -0.97
PDPN-212ENST00000621990 BSGP35613 385 aa9□□□□□ -0.97
PDPN-212ENST00000621990 GSTM5P46439 218 aa9□□□□□ -0.97
PDPN-212ENST00000621990 OR1E2P47887 323 aa9□□□□□ -0.97
PDPN-212ENST00000621990 CASP9P55211 416 aa9□□□□□ -0.97
PDPN-212ENST00000621990 TSTA3Q13630 321 aaPredicted RBP9□□□□□ -0.97
PDPN-212ENST00000621990 ZNF846Q147U1 533 aa9□□□□□ -0.97
PDPN-212ENST00000621990 NR1D2Q14995 579 aa9□□□□□ -0.97
PDPN-212ENST00000621990 EXOC3L2Q2M3D2 409 aa9□□□□□ -0.97
PDPN-212ENST00000621990 PIP5KL1Q5T9C9 394 aa9□□□□□ -0.97
PDPN-212ENST00000621990 DEPDC1Q5TB30 811 aa9□□□□□ -0.97
PDPN-212ENST00000621990 PNCKQ6P2M8 343 aa9□□□□□ -0.97
PDPN-212ENST00000621990 AHSA2Q719I0 299 aa9□□□□□ -0.97
PDPN-212ENST00000621990 SPRED2Q7Z698 418 aa9□□□□□ -0.97
PDPN-212ENST00000621990 DSG4Q86SJ6 1040 aa9□□□□□ -0.97
PDPN-212ENST00000621990 IGFN1Q86VF2 1251 aa9□□□□□ -0.97
PDPN-212ENST00000621990 LGI4Q8N135 537 aa9□□□□□ -0.97
PDPN-212ENST00000621990 ANKRD53Q8N9V6 530 aa9□□□□□ -0.97
PDPN-212ENST00000621990 DENND6BQ8NEG7 585 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms