RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 FAM162AQ96A26 154 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 PPWD1Q96BP3 646 aaKnown RBP20.41■□□□□ 0.86
SPAST-204ENST00000621856 REXO5Q96IC2 774 aaKnown RBP20.41■□□□□ 0.86
SPAST-204ENST00000621856 FAIM2Q9BWQ8 316 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 PRDM7Q9NQW5 492 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 V9GYQ6 96 aa20.41■□□□□ 0.86
SPAST-204ENST00000621856 C1orf226A1L170 272 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 SDC3O75056 442 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 TIPRLO75663 272 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 SCELO95171 688 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 C1QCP02747 245 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 HIST1H1TP22492 207 aaPredicted RBP20.4■□□□□ 0.86
SPAST-204ENST00000621856 ATP5A1P25705 553 aaKnown RBP20.4■□□□□ 0.86
SPAST-204ENST00000621856 LSSP48449 732 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 DEFB133Q30KQ1 61 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 OGFRL1Q5TC84 451 aaPredicted RBP20.4■□□□□ 0.86
SPAST-204ENST00000621856 SERPINA11Q86U17 422 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 TMEM126BQ8IUX1 230 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 KBTBD2Q8IY47 623 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 CLEC4FQ8N1N0 589 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 TRIML2Q8N7C3 387 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 ACOT4Q8N9L9 421 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 GOT1L1Q8NHS2 421 aaPredicted RBP20.4■□□□□ 0.86
SPAST-204ENST00000621856 GAL3ST3Q96A11 431 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 THAP11Q96EK4 314 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 GORASP2Q9H8Y8 452 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 EVA1BQ9NVM1 165 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 CORO2BQ9UQ03 480 aa20.4■□□□□ 0.86
SPAST-204ENST00000621856 CCDC163A0A0D9SF12 145 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 LMO7DNF2Z398 122 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 PDPK1O15530 556 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 HNRNPRO43390 633 aaKnown RBP20.39■□□□□ 0.86
SPAST-204ENST00000621856 GUCY1B2O75343 617 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 GPX2P18283 190 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 HOXA6P31267 233 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 FASLGP48023 281 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 SIGLEC14Q08ET2 396 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 TEAD4Q15561 434 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 ZCCHC8Q6NZY4 707 aaKnown RBP20.39■□□□□ 0.86
SPAST-204ENST00000621856 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.39■□□□□ 0.86
SPAST-204ENST00000621856 NATD1Q8N6N6 113 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 TMEM102Q8N9M5 508 aaPredicted RBP20.39■□□□□ 0.86
SPAST-204ENST00000621856 BAHD1Q8TBE0 780 aaPredicted RBP20.39■□□□□ 0.86
SPAST-204ENST00000621856 FAM110BQ8TC76 370 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 ZFP90Q8TF47 636 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 OR2A5Q96R48 311 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 ZNF184Q99676 751 aaPredicted RBP20.39■□□□□ 0.86
SPAST-204ENST00000621856 ZFYVE21Q9BQ24 234 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 ABCG4Q9H172 646 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 KLK4Q9Y5K2 254 aa20.39■□□□□ 0.86
SPAST-204ENST00000621856 NOBOXO60393 691 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 UBXN7O94888 489 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 NTRK1P04629 796 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 ZNF888P0CJ79 500 aaPredicted RBP20.39■□□□□ 0.85
SPAST-204ENST00000621856 DRD2P14416 443 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 CERS1P27544 350 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 SOAT1P35610 550 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 TSFMP43897 325 aaKnown RBP20.39■□□□□ 0.85
SPAST-204ENST00000621856 PPP1CAP62136 330 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 KLHL35Q6PF15 583 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 ANGPTL8Q6UXH0 198 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 ZNF551Q7Z340 670 aaPredicted RBP20.39■□□□□ 0.85
SPAST-204ENST00000621856 SDR16C5Q8N3Y7 309 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 KCT2Q8NC54 265 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 RERGQ96A58 199 aaPredicted RBP20.39■□□□□ 0.85
SPAST-204ENST00000621856 EXOSC8Q96B26 276 aaKnown RBP20.39■□□□□ 0.85
SPAST-204ENST00000621856 SLC35A5Q9BS91 424 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 SEMA6AQ9H2E6 1030 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 TAS2R9Q9NYW1 312 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 PILRAQ9UKJ1 303 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 POMT2Q9UKY4 750 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 DTNAQ9Y4J8 743 aa20.39■□□□□ 0.85
SPAST-204ENST00000621856 A0A1B0GVT2 93 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 TPST1O60507 370 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 PIAS2O75928 621 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 DHPSP49366 369 aaPredicted RBP20.38■□□□□ 0.85
SPAST-204ENST00000621856 PPM1FP49593 454 aaPredicted RBP20.38■□□□□ 0.85
SPAST-204ENST00000621856 BTN3A2P78410 334 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 NDUFAF5Q5TEU4 345 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 FAM180BQ6P0A1 224 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 ZNF438Q7Z4V0 828 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 ZCCHC7Q8N3Z6 543 aaKnown RBP20.38■□□□□ 0.85
SPAST-204ENST00000621856 CAMKVQ8NCB2 501 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 CATSPER1Q8NEC5 780 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 TM4SF19Q96DZ7 209 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 SEPHS2Q99611 448 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 SLC38A3Q99624 504 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.38■□□□□ 0.85
SPAST-204ENST00000621856 C5AR2Q9P296 337 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 FBXW2Q9UKT8 454 aa20.38■□□□□ 0.85
SPAST-204ENST00000621856 URADA6NGE7 173 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 P2RX6O15547 441 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 PEX1O43933 1283 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 PRAMEF10O60809 474 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 CREG1O75629 220 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 CHI3L1P36222 383 aaPredicted RBP20.37■□□□□ 0.85
SPAST-204ENST00000621856 RELAQ04206 551 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 LYSMD4Q5XG99 296 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 CPZQ66K79 652 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 ERICH5Q6P6B1 374 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms