RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 VN1R1Q9GZP7 353 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 BRF2Q9HAW0 419 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 KCMF1Q9P0J7 381 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 C3orf18Q9UK00 162 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 DAPP1Q9UN19 280 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SNX6Q9UNH7 406 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 WDR91A4D1P6 747 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 FAM227AF5H4B4 570 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 CDC123O75794 336 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 CHN1P15882 459 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 HIST1H1TP22492 207 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SERPINB3P29508 390 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 OTX2P32243 289 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 TSFMP43897 325 aaKnown RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 HNRNPFP52597 415 aaKnown RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ARFIP1P53367 373 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 MTTPP55157 894 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 LIM2P55344 173 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SKP1P63208 163 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 PHEXP78562 749 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 GALNT1Q10472 559 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 TBL3Q12788 808 aaKnown RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ATP1A4Q13733 1029 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ARL13AQ5H913 290 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 CLEC6AQ6EIG7 209 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 PCSK4Q6UW60 755 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 CUZD1Q86UP6 607 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 TMEM52Q8NDY8 209 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SRFBP1Q8NEF9 429 aaKnown RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 TBC1D20Q96BZ9 403 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 FAR2Q96K12 515 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ATP6V1G3Q96LB4 118 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 SERINC2Q96SA4 455 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 CSF3RQ99062 836 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 TRMOQ9BU70 441 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 NPLQ9BXD5 320 aaPredicted RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 MRPL1Q9BYD6 325 aaKnown RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ACPTQ9BZG2 426 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 C20orf27Q9GZN8 174 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 CLK4Q9HAZ1 481 aaKnown RBP13.5□□□□□ -0.25
CBWD3-217ENST00000621474 MKL2Q9ULH7 1088 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 CLDN16Q9Y5I7 305 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 KCNMB2Q9Y691 235 aa13.5□□□□□ -0.25
CBWD3-217ENST00000621474 ATRXP46100 2492 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 A0A0A6YYD5 115 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 MASP2O00187 686 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 BIRC5O15392 142 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
CBWD3-217ENST00000621474 SEMA3DO95025 777 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 FHP07954 510 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 HMOX2P30519 316 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 SSR2P43308 183 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 RHAGQ02094 409 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 ASPHQ12797 758 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 RCN2Q14257 317 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 DEFB109BQ30KR1 87 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 LINC00303Q3SY05 128 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 OR4C11Q6IEV9 310 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 KIRREL2Q6UWL6 708 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 NUDCD3Q8IVD9 361 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 AMER2Q8N7J2 671 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 ANKRD42Q8N9B4 389 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 THAP4Q8WY91 577 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 EXTL1Q92935 676 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 RGMAQ96B86 450 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 NACC2Q96BF6 587 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 MAPKAP1Q9BPZ7 522 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 DDX31Q9H8H2 851 aaKnown RBP13.49□□□□□ -0.25
CBWD3-217ENST00000621474 ZNF395Q9H8N7 513 aaPredicted RBP13.49□□□□□ -0.25
CBWD3-217ENST00000621474 SEMA3GQ9NS98 782 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 POLHQ9Y253 713 aa13.49□□□□□ -0.25
CBWD3-217ENST00000621474 A0A088AWK7 358 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 A0A1W2PQ72 361 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 SERTM1A2A2V5 107 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 TMEM233B4DJY2 109 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 H3BQF6 201 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 CYR61O00622 381 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 ITM2AO43736 263 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 B3GALT2O43825 422 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 TMPRSS11DO60235 418 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 ULK1O75385 1050 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 KRT6AP02538 564 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 KRT6BP04259 564 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 ZNF10P21506 573 aaPredicted RBP13.48□□□□□ -0.25
CBWD3-217ENST00000621474 KRT6CP48668 564 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 RAB38P57729 211 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 BTG2P78543 158 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 TGM3Q08188 693 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 CHI3L2Q15782 390 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 TBR1Q16650 682 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 MINDY4Q4G0A6 757 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 CPZQ66K79 652 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 MRM1Q6IN84 353 aaKnown RBP13.48□□□□□ -0.25
CBWD3-217ENST00000621474 TMEM205Q6UW68 189 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 SCIMPQ6UWF3 145 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 LANCL3Q6ZV70 420 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 METTL4Q8N3J2 472 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 ZCCHC7Q8N3Z6 543 aaKnown RBP13.48□□□□□ -0.25
CBWD3-217ENST00000621474 OR11G2Q8NGC1 345 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 C8orf44Q96CB5 159 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms