RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 ZDHHC21Q8IVQ6 265 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 CHCHD4Q8N4Q1 142 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 DENND6BQ8NEG7 585 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 MAFAQ8NHW3 353 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 ADAMTS15Q8TE58 950 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 UTP15Q8TED0 518 aaKnown RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TMEM121BQ9BXQ6 578 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 RAD21L1Q9H4I0 556 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TMEM184CQ9NVA4 438 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 OR6C2Q9NZP2 312 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 SAMD4AQ9UPU9 718 aaKnown RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TPST2O60704 377 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 ABHD18Q0P651 414 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 HACD2Q6Y1H2 254 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TTC29Q8NA56 475 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TRNAU1APQ9NX07 287 aaKnown RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TAS2R9Q9NYW1 312 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 PPT2Q9UMR5 302 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TESMINQ9Y4I5 508 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 CLPTM1O96005 669 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 BCHEP06276 602 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 CELA2BP08218 269 aaPredicted RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 CSNK1G2P78368 415 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 ABATP80404 500 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 TPRG1LQ5T0D9 272 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 ZNF438Q7Z4V0 828 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 FBXL6Q8N531 539 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 KAT2AQ92830 837 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 SLC6A16Q9GZN6 736 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 C3orf14Q9HBI5 128 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 SLC6A13Q9NSD5 602 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 SEC14L3Q9UDX4 400 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 CD300AQ9UGN4 299 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 RIMS3Q9UJD0 308 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 WDR87Q6ZQQ6 2873 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 EML2O95834 649 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 CSNK2A2P19784 350 aaPredicted RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 MLLT3P42568 568 aaPredicted RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 HSPA13P48723 471 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 CCT3P49368 545 aaKnown RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 ALDH6A1Q02252 535 aaKnown RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 SYT13Q7L8C5 426 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 CENPNQ96H22 339 aaPredicted RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 REXO5Q96IC2 774 aaKnown RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 KCNC2Q96PR1 638 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 ABCG4Q9H172 646 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 SEMA3GQ9NS98 782 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 ANKMY1Q9P2S6 941 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 WARS2Q9UGM6 360 aaKnown RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 PCDHA9Q9Y5H5 950 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 MTCL1Q9Y4B5 1905 aaKnown RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 OR5K4A6NMS3 321 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 ETS2P15036 469 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 PIK3CBP42338 1070 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 OR1E2P47887 323 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 LRIT3Q3SXY7 679 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 OR2L8Q8NGY9 312 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 ANKHQ9HCJ1 492 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 WSB2Q9NYS7 404 aaPredicted RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 ICKQ9UPZ9 632 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 DMTF1Q9Y222 760 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 EYSQ5T1H1 3165 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 G3V2T6 193 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 SOCS2O14508 198 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 HSD17B1P14061 328 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 IL5RAQ01344 420 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 CCINQ13939 588 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 SCARB2Q14108 478 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 SMAD2Q15796 467 aaKnown RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 SGPP1Q9BX95 441 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 PELI2Q9HAT8 420 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 TEX10Q9NXF1 929 aaPredicted RBP15□□□□□ -0.01
CPSF1-213ENST00000620219 TMCC3Q9ULS5 477 aa15□□□□□ -0.01
CPSF1-213ENST00000620219 CNOT1A5YKK6 2376 aaKnown RBP14.99□□□□□ -0.01
CPSF1-213ENST00000620219 LTBP2Q14767 1821 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 WASHC1A8K0Z3 465 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 PAX7P23759 505 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 PGDP52209 483 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 SPIBQ01892 262 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 WASH2PQ6VEQ5 465 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 ERMP1Q7Z2K6 904 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 KRT73Q86Y46 540 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 OR8J3Q8NGG0 315 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 SLC35G5Q96KT7 338 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 CNPPD1Q9BV87 410 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 RIF1Q5UIP0 2472 aaKnown RBP14.99□□□□□ -0.01
CPSF1-213ENST00000620219 PRR35P0CG20 571 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 GLULP15104 373 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 ESRRGP62508 458 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 BHLHB9Q6PI77 547 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 GATAD2AQ86YP4 633 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 HS3ST5Q8IZT8 346 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 NAGSQ8N159 534 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 LINC01555Q8NAE3 123 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 FBXO15Q8NCQ5 510 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-213ENST00000620219 A0A1B0GVT2 93 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 A8MUA0 341 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 PRMT3O60678 531 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 NUDT7P0C024 238 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 ZNF888P0CJ79 500 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms