RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PRRT3Q5FWE3 981 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 KIAA0895LQ68EN5 471 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 ABI3BPQ7Z7G0 1075 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 TMEM179BQ7Z7N9 219 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 DHRSXQ8N5I4 330 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 OR52N2Q8NGI0 321 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 GPR174Q9BXC1 333 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 TCEAL2Q9H3H9 227 aaPredicted RBP16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 SRMSQ9H3Y6 488 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 DDX31Q9H8H2 851 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 TRNAU1APQ9NX07 287 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 RPS6KA6Q9UK32 745 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 ADAM29Q9UKF5 820 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 CA14Q9ULX7 337 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 MAP4K5Q9Y4K4 846 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 TMEM265A0A087WTH1 108 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 A0A0A6YYD5 115 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 TNFRSF21O75509 655 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 IGLV3-19P01714 112 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 ALPLP05186 524 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 MAGEA2P43356 314 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 ALDH3A2P51648 485 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 CRYBA2P53672 197 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 CBLL1Q75N03 491 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 EIF3MQ7L2H7 374 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 RNF130Q86XS8 419 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 ADHFE1Q8IWW8 467 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 C11orf65Q8NCR3 313 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 EXOSC8Q96B26 276 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 HSH2DQ96JZ2 352 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 CXorf36Q9H7Y0 433 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 SMURF2Q9HAU4 748 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 KLF15Q9UIH9 416 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 ABCG2Q9UNQ0 655 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 WBP11Q9Y2W2 641 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 SNX8Q9Y5X2 465 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 AP1M2Q9Y6Q5 423 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 DGKBQ9Y6T7 804 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 PDPK1O15530 556 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 ERI3O43414 337 aaKnown RBP16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 MYF6P23409 242 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 CAPGP40121 348 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 RABIFP47224 123 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 GOLGA4Q13439 2230 aaKnown RBP16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 ZIK1Q3SY52 487 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 ZNF542PQ5EBM4 170 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 ANKRD34AQ69YU3 496 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 ZNF425Q6IV72 752 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 SPESP1Q6UW49 350 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 PATE1Q8WXA2 126 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 SDCCAG3Q96C92 435 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 PNPLA3Q9NST1 481 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 VNN3Q9NY84 501 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 PCDHGA4Q9Y5G9 962 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 SNX11Q9Y5W9 270 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 U3KQV3 271 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 hCG_2039718K7EN88 272 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 MAN2B1O00754 1011 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 TBX19O60806 448 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 GCM2O75603 506 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 SEMG1P04279 462 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 AHRP35869 848 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 CCR5P51681 352 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 ILF3Q12906 894 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 PLCL1Q15111 1095 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 TMEM35AQ53FP2 167 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 TOR1AIP1Q5JTV8 583 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 GCNT6Q5T4J0 391 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 SYT13Q7L8C5 426 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 TRIM73Q86UV7 250 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 OFCC1Q8IZS5 231 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 SVOPLQ8N434 492 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 RLN3Q8WXF3 142 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 MS4A6EQ96DS6 147 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 TPD52L3Q96J77 140 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 IL1RAPQ9NPH3 570 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 SNX7Q9UNH6 387 aa16.5■□□□□ 0.23
PCDHGC3-205ENST00000617641 TRIOBPQ9H2D6 2365 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 MDC1Q14676 2089 aaKnown RBP16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 E2F6O75461 281 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 FKBP9O95302 570 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 ATP6V1B1P15313 513 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 HOXB6P17509 224 aaKnown RBP16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 DCTP40126 519 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 MANFP55145 182 aaKnown RBP16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 VLDLRP98155 873 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 FKBP9P1Q75LS8 142 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 APLFQ8IW19 511 aaPredicted RBP16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 TBC1D19Q8N5T2 526 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 FAM160A2Q8N612 972 aaPredicted RBP16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 OR8K5Q8NH50 307 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 LMAN1LQ9HAT1 526 aa16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 WSB2Q9NYS7 404 aaPredicted RBP16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 ARHGEF17Q96PE2 2063 aaPredicted RBP16.49■□□□□ 0.23
PCDHGC3-205ENST00000617641 NOBOXO60393 691 aa16.48■□□□□ 0.23
PCDHGC3-205ENST00000617641 PRKRAO75569 313 aaKnown RBP16.48■□□□□ 0.23
PCDHGC3-205ENST00000617641 DIRAS1O95057 198 aa16.48■□□□□ 0.23
PCDHGC3-205ENST00000617641 TNFP01375 233 aa16.48■□□□□ 0.23
PCDHGC3-205ENST00000617641 CELA2BP08218 269 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms