RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SSR2P43308 183 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ASMTP46597 345 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CSNK1EP49674 416 aaKnown RBP7.42□□□□□ -1.22
NEK3-207ENST00000617054 MAZP56270 477 aaKnown RBP7.42□□□□□ -1.22
NEK3-207ENST00000617054 SPIDRQ14159 915 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ADRM1Q16186 407 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 TJAP1Q5JTD0 557 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 FRMPD2BQ6IN97 320 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ZBTB49Q6ZSB9 765 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ARPINQ7Z6K5 226 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 VTCN1Q7Z7D3 282 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 MICU2Q8IYU8 434 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 OR4N4Q8N0Y3 316 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 TRPV3Q8NET8 790 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ZCCHC10Q8TBK6 192 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 UBE2E3Q969T4 207 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 COQ8BQ96D53 544 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 HSPA12BQ96MM6 686 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 PCBD2Q9H0N5 130 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 TBC1D17Q9HA65 648 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 PELI2Q9HAT8 420 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 TMEM45AQ9NWC5 275 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 APOBEC3BQ9UH17 382 aaKnown RBP7.42□□□□□ -1.22
NEK3-207ENST00000617054 MUTYHQ9UIF7 546 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 NINQ8N4C6 2090 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ERAL1O75616 437 aaKnown RBP7.42□□□□□ -1.22
NEK3-207ENST00000617054 OPN1SWP03999 348 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 TNFRSF1BP20333 461 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 PRKACGP22612 351 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CXCR2P25025 360 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 GRK3P35626 688 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 YPEL5P62699 121 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 OLR1P78380 273 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 PHEXP78562 749 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 SLC5A12Q1EHB4 618 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 C18orf63Q68DL7 685 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 OR4C11Q6IEV9 310 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 FBXO42Q6P3S6 717 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CCDC81Q6ZN84 652 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 OLIG3Q7RTU3 272 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ERMP1Q7Z2K6 904 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 HMGN2P46Q86SG4 172 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 PTOV1Q86YD1 416 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 SLC44A2Q8IWA5 706 aaPredicted RBP7.42□□□□□ -1.22
NEK3-207ENST00000617054 RSC1A1Q92681 617 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 OR2A14Q96R47 310 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 PRPF18Q99633 342 aaKnown RBP7.42□□□□□ -1.22
NEK3-207ENST00000617054 SLC35A5Q9BS91 424 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 LRRC61Q9BV99 259 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 TRIM15Q9C019 465 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 AGPAT4Q9NRZ5 378 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 EVA1BQ9NVM1 165 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ARMC1Q9NVT9 282 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 HRASLS2Q9NWW9 162 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 UBAP1Q9NZ09 502 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 LRCH1Q9Y2L9 728 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ATG4BQ9Y4P1 393 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 PCDH15Q96QU1 1955 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 RNF103-CHMP3A0A140T963 221 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 A0A1W2PRB8 838 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 C1orf226A1L170 272 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 ZNF860A6NHJ4 632 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 PLOD2O00469 737 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 ZW10O43264 779 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 HOXC4P09017 264 aaPredicted RBP7.41□□□□□ -1.22
NEK3-207ENST00000617054 UQCRBP14927 111 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 UGT2B7P16662 529 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 FASP25445 335 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 MLLT1Q03111 559 aaPredicted RBP7.41□□□□□ -1.22
NEK3-207ENST00000617054 ZNF33BQ06732 778 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 SRSF5Q13243 272 aaKnown RBP7.41□□□□□ -1.22
NEK3-207ENST00000617054 SLAMF1Q13291 335 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 DEFB110Q30KQ9 67 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 AASDHQ4L235 1098 aaPredicted RBP7.41□□□□□ -1.22
NEK3-207ENST00000617054 TOR1AIP1Q5JTV8 583 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 PROSER1Q86XN7 944 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 RNF130Q86XS8 419 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 VPS37AQ8NEZ2 397 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 RGMAQ96B86 450 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 SMAD5Q99717 465 aaKnown RBP7.41□□□□□ -1.22
NEK3-207ENST00000617054 EFHD1Q9BUP0 239 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 CD320Q9NPF0 282 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 FAM120CQ9NX05 1096 aaKnown RBP7.41□□□□□ -1.22
NEK3-207ENST00000617054 TRNAU1APQ9NX07 287 aaKnown RBP7.41□□□□□ -1.22
NEK3-207ENST00000617054 MAGEL2Q9UJ55 1249 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 A0A1B0GTW7 788 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 KLHL33A6NCF5 533 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 TNFRSF10CO14798 259 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 P2RX6O15547 441 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 ZNF23P17027 643 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 CMPK1P30085 196 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 MANFP55145 182 aaKnown RBP7.41□□□□□ -1.22
NEK3-207ENST00000617054 POLE2P56282 527 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 BTN3A2P78410 334 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 ZP2Q05996 745 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 RGNQ15493 299 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 DEFB133Q30KQ1 61 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 NDUFAF5Q5TEU4 345 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 PRSS41Q7RTY9 318 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 CALHM3Q86XJ0 350 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms