RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DNAJC27Q9NZQ0 273 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 PTRH2Q9Y3E5 179 aaKnown RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 PCDHGA10Q9Y5H3 936 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 A8MVM7 634 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 SEC14L2O76054 403 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 RNF4P78317 190 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 SCARB2Q14108 478 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 ZNF687Q8N1G0 1237 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 NETO2Q8NC67 525 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 OR56A1Q8NGH5 318 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 NKX2-4Q9H2Z4 354 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 REXO2Q9Y3B8 237 aaKnown RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 HMX3A6NHT5 357 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 ARVCFO00192 962 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 RAB13P51153 203 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 DSC2Q02487 901 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 MYLK3Q32MK0 819 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 FRMD7Q6ZUT3 714 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 LRRC52Q8N7C0 313 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 SCCPDHQ8NBX0 429 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 SMPDL3AQ92484 453 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 CPXM1Q96SM3 734 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 SFXN1Q9H9B4 322 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 OR6C74A6NCV1 312 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 CD79BP40259 229 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 GRIA1P42261 906 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 RNASE10Q5GAN6 216 aaKnown RBP12.21□□□□□ -0.45
TCF4-248ENST00000616053 PIGGQ5H8A4 983 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 LRFN4Q6PJG9 635 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 SNX29P2Q8IUI4 249 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 MINDY1Q8N5J2 469 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 FBXO25Q8TCJ0 367 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 MYH1P12882 1939 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 TNFSF12O43508 249 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 NCS1P62166 190 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 ZNF598Q86UK7 904 aaKnown RBP12.21□□□□□ -0.45
TCF4-248ENST00000616053 VSIG10LQ86VR7 867 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 ZFPM1Q8IX07 1006 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 LRRN4Q8WUT4 740 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 METTL2AQ96IZ6 378 aaKnown RBP12.21□□□□□ -0.45
TCF4-248ENST00000616053 ZNF670Q9BS34 389 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 ACTRT3Q9BYD9 372 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 RGCCQ9H4X1 137 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 SLC39A9Q9NUM3 307 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 CLEC4EQ9ULY5 219 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 OR5K4A6NMS3 321 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 LCATP04180 440 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 THEGLP0DJG4 465 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 ADORA3P0DMS8 318 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 RPL7P18124 248 aaKnown RBP12.21□□□□□ -0.45
TCF4-248ENST00000616053 RFC2P35250 354 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 UGT2B10P36537 528 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 SLC25A52Q3SY17 297 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 MARVELD2Q8N4S9 558 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 ANKRA2Q9H9E1 313 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 BBIP1A8MTZ0 92 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 RNASET2O00584 256 aaKnown RBP12.21□□□□□ -0.45
TCF4-248ENST00000616053 ANXA7P20073 488 aaKnown RBP12.21□□□□□ -0.45
TCF4-248ENST00000616053 PTGER4P35408 488 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 KIR2DL3P43628 341 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 EEFSECP57772 596 aaKnown RBP12.21□□□□□ -0.45
TCF4-248ENST00000616053 B3GNT6Q6ZMB0 384 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 RBMXL3Q8N7X1 1067 aaKnown RBP12.21□□□□□ -0.45
TCF4-248ENST00000616053 DUSP26Q9BV47 211 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 TMEM185BQ9H7F4 350 aa12.21□□□□□ -0.45
TCF4-248ENST00000616053 CLIC3O95833 236 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 POU3F2P20265 443 aaPredicted RBP12.21□□□□□ -0.46
TCF4-248ENST00000616053 IL3RAP26951 378 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 LPGAT1Q92604 370 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 HOPXQ9BPY8 73 aaPredicted RBP12.21□□□□□ -0.46
TCF4-248ENST00000616053 TOR3AQ9H497 397 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 SMCO4Q9NRQ5 59 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 MAN2C1Q9NTJ4 1040 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 FNIP2Q9P278 1114 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 DHDHQ9UQ10 334 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 PCDHAC2Q9Y5I4 1007 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 CDC14CA4D256 554 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 PTHP01270 115 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 GABRR1P24046 479 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 MC3RP41968 323 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 DCST2Q5T1A1 773 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 GK5Q6ZS86 529 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 TMED9Q9BVK6 235 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 PLA2G12BQ9BX93 195 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 MROQ9BYG7 248 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 PAK1IP1Q9NWT1 392 aaPredicted RBP12.21□□□□□ -0.46
TCF4-248ENST00000616053 ZNF223Q9UK11 482 aaPredicted RBP12.21□□□□□ -0.46
TCF4-248ENST00000616053 H3BML4 177 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 POP7O75817 140 aaKnown RBP12.21□□□□□ -0.46
TCF4-248ENST00000616053 GLI1P08151 1106 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 FBXO48Q5FWF7 155 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 BRAT1Q6PJG6 821 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 GPR149Q86SP6 731 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 ZNF584Q8IVC4 421 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 ZADH2Q8N4Q0 377 aa12.21□□□□□ -0.46
TCF4-248ENST00000616053 SLC35A5Q9BS91 424 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms