RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 MTTPP55157 894 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 HSD17B7P56937 341 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 OR1C1Q15619 314 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 ABHD17CQ6PCB6 329 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 RPS19BP1Q86WX3 136 aaKnown RBP23.61■■□□□ 1.37
VEGFA-227ENST00000615393 RELL1Q8IUW5 271 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 CENPLQ8N0S6 344 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-227ENST00000615393 SRFBP1Q8NEF9 429 aaKnown RBP23.61■■□□□ 1.37
VEGFA-227ENST00000615393 KCTD4Q8WVF5 259 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 CDCP1Q9H5V8 836 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 ACSS3Q9H6R3 686 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 PRTFDC1Q9NRG1 225 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 SNX15Q9NRS6 342 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 CNTRLQ7Z7A1 2325 aa23.61■■□□□ 1.37
VEGFA-227ENST00000615393 SYNDIG1LA6NDD5 238 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 A8MUA0 341 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 CD46P15529 392 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 CD96P40200 585 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 MSH2P43246 934 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 SERPINB8P50452 374 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 PER3P56645 1201 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 IRF9Q00978 393 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 OC90Q02509 493 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-227ENST00000615393 E2F2Q14209 437 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 ADNP2Q6IQ32 1131 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 KLC3Q6P597 504 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 SCUBE1Q8IWY4 988 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 ZNF595Q8IYB9 648 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 KIF2BQ8N4N8 673 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 MDS2Q8NDY4 140 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 SIGLEC12Q96PQ1 595 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 KCNC2Q96PR1 638 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 ROGDIQ9GZN7 287 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 ANKRD10Q9NXR5 420 aa23.6■■□□□ 1.37
VEGFA-227ENST00000615393 A0A096LPK6 155 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 A1L4Q6 167 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 HMX2A2RU54 273 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 MAN1A2O60476 641 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 TUBB4AP04350 444 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 EPB42P16452 691 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 CERS1P27544 350 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 TYK2P29597 1187 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 SERPINB1P30740 379 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 PCDH1Q08174 1060 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 SLC13A2Q13183 592 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 ACAP2Q15057 778 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 TERF2Q15554 542 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 MED27Q6P2C8 311 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 FAM47BQ8NA70 645 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 NFAM1Q8NET5 270 aaPredicted RBP23.59■■□□□ 1.37
VEGFA-227ENST00000615393 F2RL3Q96RI0 385 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 DMGDHQ9UI17 866 aaKnown RBP23.59■■□□□ 1.37
VEGFA-227ENST00000615393 DAPP1Q9UN19 280 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 ANGPTL3Q9Y5C1 460 aa23.59■■□□□ 1.37
VEGFA-227ENST00000615393 LRRTM2O43300 516 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 KLHL2O95198 593 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 CTAGE8P0CG41 777 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 PCNAP12004 261 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 MTHFD2P13995 350 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 GFAPP14136 432 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 LIM2P55344 173 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 GLE1Q53GS7 698 aaKnown RBP23.58■■□□□ 1.37
VEGFA-227ENST00000615393 GFRALQ6UXV0 394 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 CTAGE4Q8IX94 777 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 LAS2Q8IYD9 372 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 TMEM178AQ8NBL3 297 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 NOA1Q8NC60 698 aaKnown RBP23.58■■□□□ 1.37
VEGFA-227ENST00000615393 B3GNT7Q8NFL0 401 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 ZNF473Q8WTR7 871 aaKnown RBP23.58■■□□□ 1.37
VEGFA-227ENST00000615393 IFT81Q8WYA0 676 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 FMO2Q99518 471 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 TBCDQ9BTW9 1192 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 MS4A8Q9BY19 250 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 FUT8Q9BYC5 575 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 DEFB126Q9BYW3 111 aa23.58■■□□□ 1.37
VEGFA-227ENST00000615393 CDC42EP4Q9H3Q1 356 aaKnown RBP23.58■■□□□ 1.37
VEGFA-227ENST00000615393 PNO1Q9NRX1 252 aaKnown RBP23.58■■□□□ 1.37
VEGFA-227ENST00000615393 A0A1B0GUH1 482 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 FCHO1O14526 889 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 MYO1DO94832 1006 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 STSP08842 583 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 TPP2P29144 1249 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-227ENST00000615393 EEF1DP29692 281 aaKnown RBP23.57■■□□□ 1.36
VEGFA-227ENST00000615393 CLCN2P51788 898 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 KCNK10P57789 538 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 NAA30Q147X3 362 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-227ENST00000615393 TMEM35AQ53FP2 167 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 SPINK14Q6IE38 97 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 GRHL2Q6ISB3 625 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 CHSY3Q70JA7 882 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 MAMDC2Q7Z304 686 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-227ENST00000615393 TEX9Q8N6V9 391 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 SCMH1Q96GD3 660 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 LYRM4Q9HD34 91 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 PRDM7Q9NQW5 492 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 KLHL1Q9NR64 748 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 LRFN1Q9P244 771 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 ADGRE2Q9UHX3 823 aa23.57■■□□□ 1.36
VEGFA-227ENST00000615393 USP9YO00507 2555 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-227ENST00000615393 KIF2AO00139 706 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms