RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SCUBE1Q8IWY4 988 aa16.63■□□□□ 0.25
SMN2-213ENST00000614240 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMN2-213ENST00000614240 KLHDC8AQ8IYD2 350 aa16.63■□□□□ 0.25
SMN2-213ENST00000614240 KRT78Q8N1N4 520 aa16.63■□□□□ 0.25
SMN2-213ENST00000614240 MARVELD2Q8N4S9 558 aa16.63■□□□□ 0.25
SMN2-213ENST00000614240 ASB15Q8WXK1 588 aa16.63■□□□□ 0.25
SMN2-213ENST00000614240 NPLQ9BXD5 320 aaPredicted RBP16.63■□□□□ 0.25
SMN2-213ENST00000614240 DDX47Q9H0S4 455 aaKnown RBP16.63■□□□□ 0.25
SMN2-213ENST00000614240 PRM3Q9NNZ6 103 aa16.63■□□□□ 0.25
SMN2-213ENST00000614240 KCNJ16Q9NPI9 418 aa16.63■□□□□ 0.25
SMN2-213ENST00000614240 CTNNAL1Q9UBT7 734 aa16.63■□□□□ 0.25
SMN2-213ENST00000614240 NKX2-6A6NCS4 301 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 FAM166BA8MTA8 275 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 FOXO6A8MYZ6 492 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 ACOT7O00154 380 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 OR2J2O76002 312 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 HNMTP50135 292 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 PLA2G16P53816 162 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 RAB38P57729 211 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 PPIAP62937 165 aaKnown RBP16.62■□□□□ 0.25
SMN2-213ENST00000614240 CDKL1Q00532 357 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 SLBPQ14493 270 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMN2-213ENST00000614240 IL20RBQ6UXL0 311 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 TMIGD1Q6UXZ0 262 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 GPALPP1Q8IXQ4 340 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 FAM47BQ8NA70 645 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 ACBD4Q8NC06 268 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 PSD4Q8NDX1 1056 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 LILRB4Q8NHJ6 448 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 SREK1Q8WXA9 508 aaKnown RBP16.62■□□□□ 0.25
SMN2-213ENST00000614240 ANKRD7Q92527 254 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 UCK2Q9BZX2 261 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 AICDAQ9GZX7 198 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 LIN28AQ9H9Z2 209 aaKnown RBP16.62■□□□□ 0.25
SMN2-213ENST00000614240 ADAP2Q9NPF8 381 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 RNF6Q9Y252 685 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 OARD1Q9Y530 152 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 HRH3Q9Y5N1 445 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 CLCA3PQ9Y6N3 262 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 C2CD3Q4AC94 2353 aa16.62■□□□□ 0.25
SMN2-213ENST00000614240 ANKDD1BA6NHY2 528 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 HNRNPH1P31943 449 aaKnown RBP16.61■□□□□ 0.25
SMN2-213ENST00000614240 HPDP32754 393 aaPredicted RBP16.61■□□□□ 0.25
SMN2-213ENST00000614240 GDF5P43026 501 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 PMPCAQ10713 525 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 RCN2Q14257 317 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 C18orf21Q32NC0 220 aaPredicted RBP16.61■□□□□ 0.25
SMN2-213ENST00000614240 TRIM40Q6P9F5 258 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 C16orf47Q6ZP98 133 aaPredicted RBP16.61■□□□□ 0.25
SMN2-213ENST00000614240 SLCO4C1Q6ZQN7 724 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 CCDC71Q8IV32 467 aaPredicted RBP16.61■□□□□ 0.25
SMN2-213ENST00000614240 ZNF595Q8IYB9 648 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 SLC35F6Q8N357 371 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 TMEM132CQ8N3T6 1108 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 OR5M3Q8NGP4 307 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 MS4A6EQ96DS6 147 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 VPS39Q96JC1 886 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 PWWP2AQ96N64 755 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 COPS7BQ9H9Q2 264 aaPredicted RBP16.61■□□□□ 0.25
SMN2-213ENST00000614240 PLAC1Q9HBJ0 212 aa16.61■□□□□ 0.25
SMN2-213ENST00000614240 ZNF223Q9UK11 482 aaPredicted RBP16.61■□□□□ 0.25
SMN2-213ENST00000614240 PPIEQ9UNP9 301 aaKnown RBP16.61■□□□□ 0.25
SMN2-213ENST00000614240 FAM95CA0A1B0GW59 222 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 LRIT2A6NDA9 550 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 NCF1BA6NI72 391 aaPredicted RBP16.6■□□□□ 0.25
SMN2-213ENST00000614240 NCF1CA8MVU1 366 aaPredicted RBP16.6■□□□□ 0.25
SMN2-213ENST00000614240 NPIPA2E9PIF3 369 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 NPIPA3F8WFD2 350 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 WWP2O00308 870 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 PRKNO60260 465 aaPredicted RBP16.6■□□□□ 0.25
SMN2-213ENST00000614240 NCF1P14598 390 aaPredicted RBP16.6■□□□□ 0.25
SMN2-213ENST00000614240 TNNI3P19429 210 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 GSTM2P28161 218 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 ARL4CP56559 192 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 MGAT5Q09328 741 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 ZNF460Q14592 562 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 MORF4L2Q15014 288 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 TESK1Q15569 626 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 HSDL2Q6YN16 418 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 SPNS3Q6ZMD2 512 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 RGS9BPQ6ZS82 235 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 ACAD11Q709F0 780 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 ADAMTSL2Q86TH1 951 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 SLC22A16Q86VW1 577 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 ZC3HC1Q86WB0 502 aaKnown RBP16.6■□□□□ 0.25
SMN2-213ENST00000614240 ANKMY2Q8IV38 441 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 OR2M7Q8NG81 312 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 OR10Q1Q8NGQ4 319 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 LRRC39Q96DD0 335 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 TREX2Q9BQ50 279 aaPredicted RBP16.6■□□□□ 0.25
SMN2-213ENST00000614240 ZNF559Q9BR84 538 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 CAPS2Q9BXY5 557 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 REXO4Q9GZR2 422 aaKnown RBP16.6■□□□□ 0.25
SMN2-213ENST00000614240 DEPPQ9NTK1 212 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 PSAT1Q9Y617 370 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 CSMD1Q96PZ7 3565 aa16.6■□□□□ 0.25
SMN2-213ENST00000614240 MYOCOSA0A1B0GUC4 107 aa16.59■□□□□ 0.25
SMN2-213ENST00000614240 SYNDIG1LA6NDD5 238 aa16.59■□□□□ 0.25
SMN2-213ENST00000614240 G3V3Y1 287 aa16.59■□□□□ 0.25
SMN2-213ENST00000614240 TGFBR3LH3BV60 316 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms