RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 STXBP1P61764 594 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TRA2BP62995 288 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 MC1RQ01726 317 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 RHDQ02161 417 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 SELPLGQ14242 412 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 HEPACAMQ14CZ8 416 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 FXNQ16595 210 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 LYSMD4Q5XG99 296 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 FCRL6Q6DN72 434 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 LCN8Q6JVE9 175 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ANKRD26P1Q6NSI1 321 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ARMC6Q6NXE6 501 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 FBXO42Q6P3S6 717 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 KLHL35Q6PF15 583 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 OGFOD3Q6PK18 319 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 DNAJC14Q6Y2X3 702 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TRIM73Q86UV7 250 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 C17orf82Q86X59 251 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PROSER1Q86XN7 944 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ARL14Q8N4G2 192 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 NATD1Q8N6N6 113 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 GOLM1Q8NBJ4 401 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TNIP2Q8NFZ5 429 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 OR2L5Q8NG80 312 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 MIEF2Q96C03 454 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PPCDCQ96CD2 204 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TM4SF18Q96CE8 201 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 MS4A6EQ96DS6 147 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 RSRC1Q96IZ7 334 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 CCDC115Q96NT0 180 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 KCNC2Q96PR1 638 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 SORBS1Q9BX66 1292 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 KLHL31Q9H511 634 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ERVMER34-1Q9H9K5 563 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 LHX9Q9NQ69 397 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 MIEF1Q9NQG6 463 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 SLC6A13Q9NSD5 602 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 EGFL7Q9UHF1 273 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 SNX13Q9Y5W8 968 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PI4KAP42356 2102 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 DNAH14Q0VDD8 3507 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 A0A0A6YYD5 115 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 A0A1B0GTW7 788 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TCRBV3S1A0A5B6 114 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 LILRA5A6NI73 299 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 AQP12BA6NM10 295 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 EVPLLA8MZ36 301 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 H3BNX3 289 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ARPC2O15144 300 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PPM1DO15297 605 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 NVLO15381 856 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ERI3O43414 337 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 NOBOXO60393 691 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 CPSF4O95639 269 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 B3GALT4O96024 378 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 GSNP06396 782 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ZCCHC18P0CG32 403 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 GNSP15586 552 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 SSR2P43308 183 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 DHPSP49366 369 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 MAZP56270 477 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 SESN3P58005 492 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 MRPS22P82650 360 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 KLC1Q07866 573 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 RGS1Q08116 209 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TGM3Q08188 693 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 POU4F2Q12837 409 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 BIRC2Q13490 618 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 GTDC1Q4AE62 458 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ZNF385BQ569K4 471 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TOR1AIP1Q5JTV8 583 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TRIM40Q6P9F5 258 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ABHD17CQ6PCB6 329 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 CYP2R1Q6VVX0 501 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ZNF621Q6ZSS3 439 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ASPGQ86U10 573 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ZNF761Q86XN6 746 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 C1orf210Q8IVY1 113 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 AQP12AQ8IXF9 295 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 OR10A6Q8NH74 314 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 BAHD1Q8TBE0 780 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 NT5CQ8TCD5 201 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 GAB3Q8WWW8 586 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 DUS3LQ96G46 650 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 ZNF583Q96ND8 569 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 OR2A5Q96R48 311 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 C17orf62Q9BQA9 187 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 CPPED1Q9BRF8 314 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 TBCDQ9BTW9 1192 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 AICDAQ9GZX7 198 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 KAT8Q9H7Z6 458 aaKnown RBP8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PRDM7Q9NQW5 492 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PILRAQ9UKJ1 303 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 MKL2Q9ULH7 1088 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 PCDHGB4Q9UN71 923 aa8.48□□□□□ -1.05
CCDC47-207ENST00000612558 A0A0J9YVX5 310 aa8.47□□□□□ -1.05
CCDC47-207ENST00000612558 A0A1B0GVT2 93 aa8.47□□□□□ -1.05
CCDC47-207ENST00000612558 CLIC1O00299 241 aa8.47□□□□□ -1.05
CCDC47-207ENST00000612558 TMPRSS11DO60235 418 aa8.47□□□□□ -1.05
CCDC47-207ENST00000612558 GPR37L1O60883 481 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms